Gene Avin_49440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_49440 
SymboltctE 
ID7763798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5006212 
End bp5007636 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content73% 
IMG OID643807779 
Productsensory histidine protein kinase TctE 
Protein accessionYP_002802014 
Protein GI226946941 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGATG CGGCCGGCGA CATCCGCGTC GACGGCAGCC TGCGCGGGCG CCTGCTGCGG 
CGCATGGCCG GGCTGCTGGC GGTGCTGCTG GCGGTCAGCG GGCTGAGCGC CTACTCCAAC
GGCCGCCAGG CCGCCGACCG GGCCTACGAC CGCACCCTGC TGGCCTCGGC GCGGAGCATC
GCCGACGGCC TTTCCGAGGC CGATGGCGGC CTGCGCGCGG ACATCCCCTA TCTGGCCCTG
GACAGCTTCG CCTTCGACAG CGCCGGGCGC ATCTACTACC AGGTGCTGGA TATCCACGGG
CAACTGCTGT CCGGCTACGA GAACCTGCCC GGCGCGCCGG CGAACGTCCC GCTGACCCGC
GACTATCCGG CCCTGGCGCG CTTCTACGAC GCGCATTATC GAGGCCAGAA CGTGCGGGTG
GTCAGCCTGC AGCAGCCGGT CAGCGAAACC ACCCTGAGCG GCATGGTGGA GATCCGCGTG
GCCGAGACCG AGGAGGCGCG CGAACGCATG GCGCGCGGTC TGCTCGTCGA CACCCTGCTG
CGCATGGGCC TCCTGGCGGT CGGCGCGATG GCCCTGGCCT GGTTCGTGGT CACCGCCGCG
CTGCGCCCGC TGGAGCGCCT GCGCCAGGCG GTGGAGGAGC GCAGCCCGGA AGACCTGCGG
CCCCTGCCGC CGGTCACGGT GCAGCGCGAG CTGCTGCCGC TGGTTTCCGC CCTGAACCTG
TTCACCGGCC GCCTGCGCAG CCTGCTGGAG CGCCAGTCGC AGTTCATCGC CGACGCCGCC
CACGAACTGC GCACGCCGCT GGCGGCGCTC AAGGCGCGCC TCGAACTGGG CCTGCGCGAG
CGCGAGCCGG ACGCCTGGTA CCGCACCCTG GAAGAGGTCC GGCAGAGCGG CGACCGCCTT
TCCCACCTGG CCAACCAGTT GCTCTCCTGG GCGCGCATCG AAAGCAGCGC CCAGGCCATC
GCCGAGGGCG GCGCCGAGCC GGTCGAGCTG GGCTCGCTGT GCCGCGAGCT GGGCCTGGCC
CTGGCGCCCC TGGCTCATGC TCGCGGCGTG GCGCTGGCCT TCGAGGGGCC GGGCGAGGTC
TGGGTGACGG GCGAGCCGAC GCAGCTCAAC GAACTGCTCA GCAACCTGGT GGACAACGCC
CTGGCGCACA CCCCGCCGGG CGGCAACGTG ACCCTGCGCG TCGCCGCGCC GGCCGTGCTG
GAGGTGGAGG ACGACGGTCC GGGCATCCCG GAAAGCGCCC GGCAGAAGGT CTTCGAGCGC
TTCCAGCGGC TCGACCCGCA GCGCGGCGGC GCGGGACTCG GGCTGGCCAT CGTCGGCGAG
ATCTGCCGCG CGCACCAGGC GGCGATCCGC TTGCTGGATG GCGCCGGCGG CGGGCTCAGG
GTACGGATCG AGTTCCCGCC GGTGCGCCGG GCGGAGGAAG CGTAG
 
Protein sequence
MNDAAGDIRV DGSLRGRLLR RMAGLLAVLL AVSGLSAYSN GRQAADRAYD RTLLASARSI 
ADGLSEADGG LRADIPYLAL DSFAFDSAGR IYYQVLDIHG QLLSGYENLP GAPANVPLTR
DYPALARFYD AHYRGQNVRV VSLQQPVSET TLSGMVEIRV AETEEARERM ARGLLVDTLL
RMGLLAVGAM ALAWFVVTAA LRPLERLRQA VEERSPEDLR PLPPVTVQRE LLPLVSALNL
FTGRLRSLLE RQSQFIADAA HELRTPLAAL KARLELGLRE REPDAWYRTL EEVRQSGDRL
SHLANQLLSW ARIESSAQAI AEGGAEPVEL GSLCRELGLA LAPLAHARGV ALAFEGPGEV
WVTGEPTQLN ELLSNLVDNA LAHTPPGGNV TLRVAAPAVL EVEDDGPGIP ESARQKVFER
FQRLDPQRGG AGLGLAIVGE ICRAHQAAIR LLDGAGGGLR VRIEFPPVRR AEEA