Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_49310 |
Symbol | |
ID | 7763786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4989948 |
End bp | 4991186 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643807767 |
Product | outer membrane porin |
Protein accession | YP_002802002 |
Protein GI | 226946929 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAA CCCCGCTCGC CTCGGGCCTG ACCGCCACGG CCCTGCTCGG AATGGCTTTT CCCCCGCCCG CCAAGGCCGA CTTCCTGGAA GACAGCAAGG CCAGCCTCGA ACTGCGCAAC TTCTACTTCA ACAGCGACTA CCGCCAGGAC GGTGCCAACC AGTCCAAGCG CGACGAATGG GCTCAGGGCT TCCTGCTGCG CTACGAGTCC GGCTTCACCG AAGGCACGGT CGGCTTCGGC GTCGATATGC TTGGCCTGCT GGGCCTGAAG CTGGACTCCG GACCGGAGCG ACAGAACTCC GGCCTGCTGC CGGTGGGCGA CGACAAGGCG CCGGACAGCT ACAGCCGCCT GGGCGCCACC GCCAAGGTCA GGATCTCCGA CAGCGTGCTG CGCATCGGCA CGCTGGACCC GCGCCTGCCG ACCGTCCTCC CCAACGATTC GCGCCTGCTG CCGCAGACCT TCCAGGGCAG CCAACTGACG TTCAAGGAGA TCGACGGGCT GACCATCGAT GCCGGCCGGC TGACGCGGAA CAACCTGCGC AACGAAAGCA ACCGCGAGGA CCTGGCCGTC ACCGGCAAGG GCATCACCGG CGAGCGGAGC AGCGACCGCT TCGACTTCGC CACCCTCAGC TACCGCTGGG ACAACCAACT GACCACCACC TACAGCTACG CCAGGCTGGA CGAGAATTAC CGGCAGCACA TCGTCAACCT CGTGCATGTG CTGCCCATCG ACAAGCGCCA GTCGTTCAGG AGCGACCTGC GCTTCGCCCG CTCCCGCGAG GACGGCGACA CCAATGTCGA CAACGACGCC TTCGGCGCCC GCTTCACTTA CCGCCTGGAC GGACACGGCT TCGGCGCCGC CTACCAGAAG ATGAGCGGCG AAACGGGTTT CCCGCGCATC GATGGCACCG ACCCGTTCCT GGTGAACTAC GTGATGCTCT CGCCGGACTT CGCCAACCCC GACGAGAAGT CCTGGCAGTT GCGCTACGAC TTCGACTTTG CCTCCGTGGG CATTCCCGGC CTGACCTTCA TGACCCGCTA CCTGCGCGGC GACAACTTCG ACCGCGGCGC CAAAGAAGGC AGGGAATGGG AGCGCAACAC CGATATCGCC TACGTCTTCC AGAGCGGCTC GCTGAAGAAC CTCGGCCTGA AATGGCGCAA CGGCACCTAC CGCAGCAATG GCGGCAGCGA CATCGACCAG AACCGGGTCA TCGTCAGCTA CACGATTCCT CTGCTGTAA
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Protein sequence | MYKTPLASGL TATALLGMAF PPPAKADFLE DSKASLELRN FYFNSDYRQD GANQSKRDEW AQGFLLRYES GFTEGTVGFG VDMLGLLGLK LDSGPERQNS GLLPVGDDKA PDSYSRLGAT AKVRISDSVL RIGTLDPRLP TVLPNDSRLL PQTFQGSQLT FKEIDGLTID AGRLTRNNLR NESNREDLAV TGKGITGERS SDRFDFATLS YRWDNQLTTT YSYARLDENY RQHIVNLVHV LPIDKRQSFR SDLRFARSRE DGDTNVDNDA FGARFTYRLD GHGFGAAYQK MSGETGFPRI DGTDPFLVNY VMLSPDFANP DEKSWQLRYD FDFASVGIPG LTFMTRYLRG DNFDRGAKEG REWERNTDIA YVFQSGSLKN LGLKWRNGTY RSNGGSDIDQ NRVIVSYTIP LL
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