| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49080 |
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| Symbol | gabD |
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| ID | 7763766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4968374 |
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| End bp | 4969825 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643807747 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_002801982 |
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| Protein GI | 226946909 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ACGATGCCCG GCTGTTCCGC CAACAGGCTT ACATCGAGGG TCGCTGGGTG
GATGCCGACG GCGGGCAGAC CCTCGCGGTG AACAATCCGG CCAGCAACGA GATCCTCGGC
GGCGTGCCGA AAATGGGCGC GGCGGAGACC CGCCGCGCCA TCGAGGCCGC CGAGCGGGCG
CTGCTGGCCT GGCGCGCGCT GACCGCCAAG GAGCGCGCGG GCAAGCTGCG GTGCTGGTTC
GAACTGCTGC TCGAGCATCA GGACGACCTG GCCCGGCTGA TGACCCTGGA GCAGGGCAAG
CCGCTGGCCG AGGCGCGCGG CGAGATCGCC TATGCCGCCT CCTTCCTCGA ATGGTTCGCC
GAGGAGGCCA AGCGCATCTA CGGCGACACC ATCCCCGGCC ACCAGGCGGA CAAGCGCATC
CTGGTGATCA AGCAGCCGGT CGGCGTCTGC GCGGCCATCA CGCCATGGAA CTTCCCGGCG
GCGATGATCA CCCGCAAGGC CGGCCCGTCA CTGGCCGCCG GCTGCACCCT GGTGCTCAAG
CCGGCCTCGC AGACGCCCTT CTCGGCGCTG GCGCTGGCCG AGCTGGCCGA GCGCGCCGGC
ATTCCGGCGG GGGTATTCAA CGTGGTCACC GGCAGCGCCG CCGAGATCGG CGGCGAACTG
ACCGCCAACC CGATCGTACG CAAGCTGTCC TTCACCGGCT CCACCGAGAT CGGCCGCCAG
TTGATGGCCC AGTGCGCCAG GGACATCAAG AAGGTTTCCC TGGAACTGGG CGGCAACGCA
CCCTTCATCG TCTTCGACGA CGCCGATCTG GACGCGGCGG TGGAGGGCGC GCTGGCTTCG
AAATACCGCA ACGCCGGGCA GACCTGCGTG TGCGCCAACC GCCTGTACGT GCAGGACGGC
GTGTACGACG CCTTCGCCGA GAAGCTCAGG GCCGCGGTGG CGCGCCTGAA GGTCGGCAAC
GGCCTGGAGG AAGGGGTGAG CATCGGTCCG TTGATCGACG ACAAGGCGGT GGGCAAGGTC
GAGGAACACA TCGCCGATGC GGTTTCCCGC GGCGCCAGGG TGATCGCCGG CGGTCGGCCC
CACGCGCTCG GTGGCACCTT TTTCGAACCG ACCATTCTCG CCGAGGTGCC GGCGGATGCG
CGGGTCGCCC GCGAGGAGAC CTTCGGGCCG CTGGCCCCGC TGTTCCGCTT CGGGGACGAC
GACGAGGCGA TCGCCCTGGC CAATGCCACC GAGTTCGGTC TGGCCGCCTA TTTCTACGCC
CGCGACCTGT CCCGGGTATT CCGCGTGGCC GAGTCGCTGG AATACGGCAT CGTCGGCGTC
AACACCGGGC TGATCTCCAC CGAGGTGGCG CCGTTCGGCG GGGTCAAGGC CTCGGGCCTG
GGCCGCGAGG GCTCCAAGTA CGGTATCGAG GACTATCTGG AGATCAAGTA TCTCTGCCTC
GGCGGTATCT GA
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| Protein sequence | MQLNDARLFR QQAYIEGRWV DADGGQTLAV NNPASNEILG GVPKMGAAET RRAIEAAERA
LLAWRALTAK ERAGKLRCWF ELLLEHQDDL ARLMTLEQGK PLAEARGEIA YAASFLEWFA
EEAKRIYGDT IPGHQADKRI LVIKQPVGVC AAITPWNFPA AMITRKAGPS LAAGCTLVLK
PASQTPFSAL ALAELAERAG IPAGVFNVVT GSAAEIGGEL TANPIVRKLS FTGSTEIGRQ
LMAQCARDIK KVSLELGGNA PFIVFDDADL DAAVEGALAS KYRNAGQTCV CANRLYVQDG
VYDAFAEKLR AAVARLKVGN GLEEGVSIGP LIDDKAVGKV EEHIADAVSR GARVIAGGRP
HALGGTFFEP TILAEVPADA RVAREETFGP LAPLFRFGDD DEAIALANAT EFGLAAYFYA
RDLSRVFRVA ESLEYGIVGV NTGLISTEVA PFGGVKASGL GREGSKYGIE DYLEIKYLCL
GGI
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