Gene Avin_48280 details

Gene Information

• Locus tag: Avin_48280
• Symbol: rpiA-2
• ID: 7763689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4893365
• End bp: 4894045
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643807671
• Product: Ribose 5-phosphate isomerase
• Protein accession: YP_002801906
• Protein GI: 226946833
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0120] Ribose 5-phosphate isomerase
• TIGRFAM ID: [TIGR00021] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGG ACCAGCTCAA GCAGGCCGTG GCCCAGGCCG CCCTCGACCA CATCCTTCCG 
CAGCTCACTC GGCAGAGCAT CATCGGCGTC GGCACCGGCT CCACCGCCAA TTTCTTCATC 
GACCTGCTGG CTCGCTACCG GATGGACTTC GATGGCGCCG TGGCCAGTTC CGAAGCCACC 
GCCGCCCGCC TGAAAGGCCA CGGCATCGAA GTGCACGATC TGAACAACGT CGTCGAACTG 
GAGTTCTACG TGGACGGCGC CGACGAGTGC AACAAGCATC TGGAGCTGAT CAAGGGCGGC 
GGCGCCGCGC TGACCCGCGA GAAGATCGTC GCCGCGGTGG CCCGGACCTT CATCTGCATC 
GCCGACGAGA GCAAGCGGGT CGATTTTCTC GGCGACTTCC CGCTGCCGGT GGAGGTGATT 
CCCATGGCCC GCAGCCATGT GGCGCGCCAA CTGGTCATGC TGGGCGGCGA CCCGGTCTAC 
CGCGAAGGCG TGGTGACCGA CAACGGCAAC GTGATCCTCG ACGTGTACAA CATGCAGATC 
ACCAACCCCA GACAACTGGA GTCGGACATC AACAACATCG TCGGAGTGGT CTGCAACGGG 
CTGTTCGCCG CGCGTCCGGC CGACCTGCTG CTGCTCGGCA CCCGCAACGG GGTGGAGCGC 
ATCGAGCGCC CGCGCCGCTG A 

 

Protein sequence

MTQDQLKQAV AQAALDHILP QLTRQSIIGV GTGSTANFFI DLLARYRMDF DGAVASSEAT 
AARLKGHGIE VHDLNNVVEL EFYVDGADEC NKHLELIKGG GAALTREKIV AAVARTFICI 
ADESKRVDFL GDFPLPVEVI PMARSHVARQ LVMLGGDPVY REGVVTDNGN VILDVYNMQI 
TNPRQLESDI NNIVGVVCNG LFAARPADLL LLGTRNGVER IERPRR