| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48190 |
|---|
| Symbol | |
|---|
| ID | 7763681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4884653 |
|---|
| End bp | 4885435 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807663 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002801898 |
|---|
| Protein GI | 226946825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.627972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTC TGCTGTATCT GCCGCTGGGG GCCGTGGCCG GTGTGCTGGC CGGACTGTTC
GGCATCGGCG GTGGAATAAT CATAGTGCCG GTGCTGGTGT TCAGTTTCAC CGCGCAGGGC
TTCGATCCGG CCGTGTTGAC CCACCTGGCG GTAGGTACCT CGCTCGCCAC CATCGTCTTC
ACGTCGATCA ACTCGGTGAT CGCCCATCAC CGCAGGGGGG CGGTACTCTG GCCGCTGTTC
GTCTGGCTGA CGGCCGGCAT CCTCGTCGGT GCGGTGCTCG GCAGCCTGAC CGCCGCGGCG
ATCCAGGGGC CGATGCTGCA GAAGATCATC GGCGTGTTCG CCATCGCCGT CGGCCTGCAG
ATGGGCCTCG ACCTCAAGCC CAGGGCCAGC CGCGGGGTGC CCGGCAAGTC CGCCCTCGGC
CTGGCCGGCG TGGTGATCGG CTGGGCTTCG GCGATCTTCG GCATCGGCGG CGGCTCGCTC
ACCGTGCCTT TCCTGACCTG GCGCAGCGTG CCGATGCCGC AGGCGGTGGC GACCTCGGCG
GCCTGCGGTC TGCCGATCGC CCTGTGCAGC GCGCTGAGCT TCATGGCCGT CGGCTGGAAC
GAGACCCATC TGCCGGCCTG GAGCCTGGGC TTCGTCTACT TGCCGGCGCT GCTCGGCATC
GCCGCCACCA GCATGTTCTT CGCCCGCTTC GGCGCCAACC TGGCGCACCG ACTGCCGCCG
CGCCTGCTCA AGCGCCTGTT CGCCCTGCAG TTGTCCGCCG TCGGACTGTA TTTCCTGTTC
TGA
|
|---|
| Protein sequence | MEFLLYLPLG AVAGVLAGLF GIGGGIIIVP VLVFSFTAQG FDPAVLTHLA VGTSLATIVF
TSINSVIAHH RRGAVLWPLF VWLTAGILVG AVLGSLTAAA IQGPMLQKII GVFAIAVGLQ
MGLDLKPRAS RGVPGKSALG LAGVVIGWAS AIFGIGGGSL TVPFLTWRSV PMPQAVATSA
ACGLPIALCS ALSFMAVGWN ETHLPAWSLG FVYLPALLGI AATSMFFARF GANLAHRLPP
RLLKRLFALQ LSAVGLYFLF
|
|---|
| |