Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_47400 |
Symbol | ubiD |
ID | 7763603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4812702 |
End bp | 4814168 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643807585 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_002801820 |
Protein GI | 226946747 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACT CCGATCTTCG CGACTTCCTG CGCGCCCTGG AGGCGCGTGG CGAGCTCAAG CGCATCCAGA CGCCGGTCTC GCCCATACTG GAAATGACCG AAATCTGCGA TCGTACCTTG CGTCGCAGCG GGCCCGCTCT GCTGTTCGAG AAGCCGATAG GTTTCGACAT GCCGGTGCTC GGCAACCTGT TCGGCACACC GCAGCGCGTG GCGTTCGGCA TGGGGGCCGA GGATGTCTCC GAACTGCGCG AGATCGGCCG GCTGCTGGCC CTCCTCAAGG AGCCGGAGCC GCCCAAGGGG CTCAAGGATG CCTGGGACAA GCTGCCGCTT TTCAAGAAAG TGCTCAGCAT GGCGCCCAAG GTGCTGAAGG ATGCGCCCTG CCAGGAAGTG ATCCTCGAAG GCGAGGATGT CGATCTCGGC AGGCTGCCCG TGCAGCATTG CTGGCCAGGC GATGCCGCGC CGCTGATCAC CTGGGGGCTG ACCATCACCC GCGGACCGAA CAAGGAGCGG CAGAACCTCG GCATCTACCG GCAGCAGGTG CTCGGCCGCA ACAAGGTGAT CATGCGCTGG CTCAGCCACC GTGGCGGCGC CTTGGATTAC CGCGAATGGT GCCAGAAACA CCCTGACCGG CCCTATCCGG TGGCGGTGGC GCTCGGGGCC GACCCGGCGA CCATCCTCGG TGCGGTCACG CCGGTGCCGG ACACCCTGTC CGAATACGCC TTCGCCGGCT TGCTGCGTGG CCAGCGTACC GAACTGGTCA AGGCGGTCGG CAGCGATCTG CAGGTGCCGG CCAGCGCCGA GATCGTGCTG GAGGGGCACA TCCATCCGGG AGAGATGGCC GATGAGGGGC CCTATGGCGA CCATACCGGC TACTACAACG AGGTCGACCG TTTCCCGGTG TTCACCATCG AGCGCATCAC CCGCCGACGC GATGCCATCT ACCACAGCAC CTACACCGGA CGTCCGCCGG ACGAGCCCGC CGTGCTCGGC GTGGCGCTGA ACGAAGTGTT CGTGCCGATC CTGCAGAAGC AGTTCCCCGA GATCGTCGAT TTCTACCTGC CGCCGGAGGG CTGCTCCTAC CGCATGGCGG TGGTGACCAT CAGGAAGCAG TATCCGGGCC ACGCCAAGCG GGTGATGCTG GGGGTCTGGT CATTCCTGCG CCAGTTCATG TATACCAAGT TCGTCATCGT CACCGACGAC GACATCGACG CCCGTGACTG GAACGATGTG ATCTGGGCCA TCACCACACG CATGGACCCC AAGCGCGACA CCGTGCTGAT CGACAACACG CCCATCGATT ATCTCGATTT CGCCTCGCCG GTCTCCGGCC TGGGTTCGAA GATGGGGCTG GATGCCACCC ACAAGTGGCC GGGCGAGACC AGCCGCGAAT GGGGGCGGGC CATCCGTCAG GATCCGGCTG TGAAGCAGCG TGTCGACGAG CTCTGGCCGC TGCTGGGCCT CGACTGA
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Protein sequence | MKYSDLRDFL RALEARGELK RIQTPVSPIL EMTEICDRTL RRSGPALLFE KPIGFDMPVL GNLFGTPQRV AFGMGAEDVS ELREIGRLLA LLKEPEPPKG LKDAWDKLPL FKKVLSMAPK VLKDAPCQEV ILEGEDVDLG RLPVQHCWPG DAAPLITWGL TITRGPNKER QNLGIYRQQV LGRNKVIMRW LSHRGGALDY REWCQKHPDR PYPVAVALGA DPATILGAVT PVPDTLSEYA FAGLLRGQRT ELVKAVGSDL QVPASAEIVL EGHIHPGEMA DEGPYGDHTG YYNEVDRFPV FTIERITRRR DAIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY RMAVVTIRKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DIDARDWNDV IWAITTRMDP KRDTVLIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET SREWGRAIRQ DPAVKQRVDE LWPLLGLD
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