Gene Avin_46970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46970 
Symbolgcp 
ID7763560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4767396 
End bp4768421 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID643807541 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_002801777 
Protein GI226946704 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTTC TGGGGCTGGA AACCTCCTGC GACGAAACCG GCGTCGCGCT TTACGACAGC 
CGGCGCGGCC TGCTGGCCGA CGCGCTGTTC AGCCAGATCG ATCTGCACCG CATCTATGGC
GGGGTAGTGC CCGAACTGGC CTCGCGGGAT CACGTCAAGC GCATGCTGCC GCTCTTGCGC
CAGGTGCTCG ACGAATCCGG CTGCCGCACC GGGGACATCG ACGGCATCGC CTATACCGCA
GGACCCGGCC TGGTCGGCGC GCTGCTGGTC GGCGCCTCCT GCGCCCAGGC GCTGGCGCTG
GCCTGGGGGG TTCCGGCGCT CGGCGTGCAT CACATGGAGG GTCATCTGCT GGCGCCGATG
CTGGAGGAAC AGCCGCCGCA GTTTCCCTTC GTCGCCCTGC TGGTTTCCGG CGGTCATACC
CAACTGGTGC GGGTCGACGG CATCGGTCGC TACCAGGTGC TCGGCGAGTC GCTGGACGAC
GCCGCCGGCG AGGCTTTCGA TAAGACCGCC AAGCTGCTCG GCCTCGGTTA TCCCGGCGGT
CCGGAGATCG CCCGCTTGGC ACAGGACGGC CGGCCCGGGC GTTTCGTCTT CCCGCGGCCG
ATGACCGACC GGCCAGGCCT GGAGTTCAGC TTCAGCGGCC TCAAGACCTT CGCCCTGAAT
ACCTGGCAGC ACTGCCGGGC GAGCGGCGAC GACGGCGAGC AATCGCGCCG CGATATCGCT
CTGGCCTTCC AGCAGGCGGT GGTGGAGACG CTGATCATCA AGTGCCGGCG GGCGCTGAAG
CAGACCGGCC TGAAGCGTCT GGTCATCGCC GGCGGGGTGA GTGCCAACCA GGCGTTGCGT
TCGGCGCTGG AGCGGATGCT CGGCGAACTG GATGGCCAGG TGTTCTACGC CCGGCCGCGC
TTCTGCACCG ACAACGGCGC GATGATCGCC TATGCTGGCT GCCAGCGTTT GCTGGCCGGC
CAGCGGGATG GGCCGGCGAT TCAGGTCCAT GCGCGCTGGC CGATGGAGAC CCTGCCGGCG
CTCTGA
 
Protein sequence
MLVLGLETSC DETGVALYDS RRGLLADALF SQIDLHRIYG GVVPELASRD HVKRMLPLLR 
QVLDESGCRT GDIDGIAYTA GPGLVGALLV GASCAQALAL AWGVPALGVH HMEGHLLAPM
LEEQPPQFPF VALLVSGGHT QLVRVDGIGR YQVLGESLDD AAGEAFDKTA KLLGLGYPGG
PEIARLAQDG RPGRFVFPRP MTDRPGLEFS FSGLKTFALN TWQHCRASGD DGEQSRRDIA
LAFQQAVVET LIIKCRRALK QTGLKRLVIA GGVSANQALR SALERMLGEL DGQVFYARPR
FCTDNGAMIA YAGCQRLLAG QRDGPAIQVH ARWPMETLPA L