| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_46750 |
|---|
| Symbol | |
|---|
| ID | 7763538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4744677 |
|---|
| End bp | 4745450 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643807519 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002801755 |
|---|
| Protein GI | 226946682 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.658343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTC GCATCAATCC GTTTTGTCTC GATGGCCGGC AGGCTCTTCT GACGGGTTCC
TGTCGCGGTA TCGGCTTCGA ACTGGCTCGC GGTTTGGGAC GGGCCGGAGC AAAAGTGCTT
ATCAATGGCC GCGATAACGA GCGCACTCAT GCCGCCTGCG CGAAACTTCG CGATGAAGGC
CTCATGGCGG AAGCGGTAGT TTTCGACGTG ACCGATTACC GACAATCCGA AACCGCGATC
GACGATGTGG AAAACCGCCT CGGTCCCATC GATATATTGG TCAACAATGC CGGCATTCAG
CATCGTGCCC CATTGGAAGA GTTCGCCCAT GAAAAATGGC GTGAACTCAT GCAGACCAAT
CTCGATGCGG TCTTCTACGT ATCTCAGGCG GTCGCCCGTC ATATGATCGG CCGCAAACGC
GGCAAGATCA TCAACATCGG TTCGGTGCAA AGCGAACTGG CACGCCCCTC GATCACACCT
TATGCGGCCA GCAAAGGTGC GGTGCGCATG CTTACGCGGG GCATGTGCGC GGATTGGGCG
CGTTATGGCA TTCAAACCAA TGGTCTTGCT CCGGGGTATT TCCAGACGGA ACTCAACCGC
GCTTTGGTGG AGGACCGGGA ATTCTCCGAT TGGTTATGCA AACGCACACC GGCCGGCCGT
TGGGGCCAGG TCGAGGAGTT GTGCGGCGCC GCGATTTTCC TCGCCTCGTC CGCCTCCGAT
TTCGTCAACG GCCAGATGCT CTATGTCGAT GGCGGTCTGA CCAGCGTGGT TTGA
|
|---|
| Protein sequence | MSTRINPFCL DGRQALLTGS CRGIGFELAR GLGRAGAKVL INGRDNERTH AACAKLRDEG
LMAEAVVFDV TDYRQSETAI DDVENRLGPI DILVNNAGIQ HRAPLEEFAH EKWRELMQTN
LDAVFYVSQA VARHMIGRKR GKIINIGSVQ SELARPSITP YAASKGAVRM LTRGMCADWA
RYGIQTNGLA PGYFQTELNR ALVEDREFSD WLCKRTPAGR WGQVEELCGA AIFLASSASD
FVNGQMLYVD GGLTSVV
|
|---|
| |