Gene Avin_46450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46450 
Symbol 
ID7763509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp4719655 
End bp4720272 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID643807490 
ProductTransporter, LysE family 
Protein accessionYP_002801726 
Protein GI226946653 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATCA GCATGTTGGC CGCCTTCTGG GCGGTTTCGT TTTTGTTCGT GATCACGCCT 
GGTGTCGATT GGGCCTATAT GATTTCCGCC GGTATGCGCG ATCGGGCGGT GGTTCCCGCC 
GTGGTGGGAT TGCTGCTCGG GCATTTGGCG GTGAGCGCGA TCGTGGCCGC CGGTGTGGGT 
GGGCTTGTGG CCGGCGCTCC CCTGGCGTCG TCGATGCTCA CCGTGGCCGG AGCCGCCTAT 
CTGCTGTGGC TGGGAATCAG TGTGATTGTC CGCCCTCCCG TCCCCCTGGC GGGAGAAGTA 
CGGCAGTTTG ACTCGCCGTC GCGCTGGACT TTGACGGGCG CCTGTGTCAG CGGCCTGAAC 
CCGAAAGTAT TCTTGCTGTT TCTGGCGTTA CTACCCCAGT TCACCGACCC GCAGGGGGCA 
TGGCCCGTAC CGGCGCAGAT CATCGTTCTG GGCTTGGTCC ATGTCTTCAG TTGCGGGGTG 
ATTTATCTAC TGGTCGGTTT CAGTGTTCAA GCCGTTCTGA AAACGCGGCC AGCCGCGGCC 
AAGCTTGTCG ACCGCCTTTC CGGGGGAGCG ATGATCGTCG TCGCGGCGCT CTTGCTGACG 
GAACAGGCGA TTGGCTGA
 
Protein sequence
MTISMLAAFW AVSFLFVITP GVDWAYMISA GMRDRAVVPA VVGLLLGHLA VSAIVAAGVG 
GLVAGAPLAS SMLTVAGAAY LLWLGISVIV RPPVPLAGEV RQFDSPSRWT LTGACVSGLN 
PKVFLLFLAL LPQFTDPQGA WPVPAQIIVL GLVHVFSCGV IYLLVGFSVQ AVLKTRPAAA 
KLVDRLSGGA MIVVAALLLT EQAIG