Gene Avin_45910 details

Gene Information

• Locus tag: Avin_45910
• Symbol: ahpC
• ID: 7763457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4662884
• End bp: 4663447
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643807435
• Product: Alkyl hydroperoxide reductase
• Protein accession: YP_002801676
• Protein GI: 226946603
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCTGA TCAACACTGA AGTCAAGCCG TTCAAAGCCA CCGCCTACCA CAACGGCAAG 
TTCATCGACG TCACCGAAGC CGACCTGCAA GGAAAGTGGT CCGTATTCTT CTTCTACCCG 
GCCGACTTCA CTTTCGTCTG CCCGACCGAG CTGGGCGACC TGGCCGACAA CTACGCCGAA 
TTCCAGAAGC TGGGCGTGGA AATCTATGCC GTGTCCACCG ACACCCACTT CACCCACAAG 
GCCTGGCACG ACAGCTCCGA GACCATCAAG AAACTGCAGT TCCCGATGGT CGGTGACCCG 
ACTCTGGCCA TCTCCCGCAA TTTCGAAGTG CTGATCGAGG AAGCCGGTCT GGCCGAACGT 
GGCACCTTCG TCGTCGACCC GCAGGGCAAG ATCCAGATCA TCGAGCTGAA CGCCGGCAAC 
ATCGGTCGCG ATGCCAATGA ACTGCTGCGC AAGATCAAGG CTGCCCAGTA CGTCGCCTCC 
CACCCGGGCG AAGTCTGCCC GGCCAAGTGG AAGGAAGGCG AAGGCACCCT GAAGCCGTCC 
CTGGATCTGG TCGGCAAGAT CTGA 

 

Protein sequence

MSLINTEVKP FKATAYHNGK FIDVTEADLQ GKWSVFFFYP ADFTFVCPTE LGDLADNYAE 
FQKLGVEIYA VSTDTHFTHK AWHDSSETIK KLQFPMVGDP TLAISRNFEV LIEEAGLAER 
GTFVVDPQGK IQIIELNAGN IGRDANELLR KIKAAQYVAS HPGEVCPAKW KEGEGTLKPS 
LDLVGKI