| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45900 |
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| Symbol | ntrC |
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| ID | 7763456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 4661169 |
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| End bp | 4662605 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643807434 |
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| Product | nitrogen regulation protein, sigma 54-dependent response regulator NtrC (NR(I)) |
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| Protein accession | YP_002801675 |
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| Protein GI | 226946602 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAA GCGAAACCGT GTGGATCGTC GACGACGACC GCTCCATCCG TTGGGTCCTG
GAAAAGGCCC TGCAACAGGA AGGCATGACC ACCCAGAGCT TCGACAGCGC GGACGGCGTG
CTCAGCCGCC TGTCCCGCCA GCGGCCCGAC GTGATCATCT CCGACATCCG CATGCCCGGT
GCCAGCGGCC TCGAGCTGCT GGCGCAGATC CGCGAGCATT ACCCGCGCCT GCCGGTGATC
ATCATGACCG CGCACTCCGA CCTGGACAGC GCGGTGGCCT CCTACCAGGG CGGTGCCTTC
GAATACCTGC CCAAGCCGTT CGACGTCGAC GAGGCGGTGT CGCTGATCAA GCGTGCCAAC
CTGCACGCCC AAGAGCAGCA GGGGCTGGAG GTGCCAACCA TCCAGGCCAA CACTCCGGAA
ATCATCGGCG AGGCGCCGGC GATGCAGGAG GTATTCCGTG CCATCGGCCG CCTCTCCCAC
TCCAACATCA CCGTGCTGAT CAACGGCGAG TCCGGTACCG GCAAGGAACT GGTCGCCCAT
GCCCTGCACC GTCACAGCCC GCGTGCCAAG GCCCCCTTCA TCGCGCTGAA CATGGCGGCG
ATCCCGAAGG AACTGATGGA GTCCGAGCTG TTCGGCCATG AGAAGGGTGC CTTCACCGGC
GCCGCCAGCC TGCGCCGCGG ACGCTTCGAG CAGGCCGACG GCGGCACCCT GTTCCTCGAC
GAGATCGGCG ACATGCCGGC CGACACCCAG ACACGCCTGT TGCGCGTGCT GGCCGACGGC
GAGTTCTATC GGGTCGGCGG TCACACGCCG GTCAAGGTCG ACGTACGAAT CATCGCCGCC
ACCCATCAGA ACCTGGAAAA CCTGGTGCAG GCTGGCAAGT TTCGCGAGGA TCTGTTCCAT
CGCCTGAACG TCATCCGCAT CCACATCCCG CGCCTCTCCG ACCGTCGCGC CGACATCCCC
GCACTGACCC GGCATTTCCT CAACCGCGCC GCCGTGGAAC TGGCGGTCGA GCCCAAGACG
CTCAAGCCGG AAACCGAGGA GTACCTGAGC AATCTGCCCT GGCCCGGCAA CGTGCGCCAA
CTGGAGAACA CCTGCCGCTG GATCACCGTG ATGGCCTCGG GCCGCGAGGT GCACATCGAC
GACCTGCCGC CGGAACTGCT CAGCCATGCC CAGGAGAACG CGCCGGCCAG CAACTGGGAA
CAGGCCCTGC GTCAGTGGAC CGATCAGGCC CTGGCCCGCG GTCAGTCGAA CCTGCTGGAC
ATCGTCGTGC CGGCCTTCGA GCGGGTGATG ATCGAGAGCG TACTCAAGCA CACCGCCGGA
CGCCGTCGCG ATGCGGCCCT GCTGCTCGGC TGGGGACGCA ACACCCTGAC GCGCAAGATC
AAGGAACTCG GCATGAACGT AGGCGGCAGC GACGAGGAAG ACGGCGACGA GGGCTGA
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| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV LSRLSRQRPD VIISDIRMPG
ASGLELLAQI REHYPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLIKRAN
LHAQEQQGLE VPTIQANTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRAK APFIALNMAA IPKELMESEL FGHEKGAFTG AASLRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHTP VKVDVRIIAA THQNLENLVQ AGKFREDLFH
RLNVIRIHIP RLSDRRADIP ALTRHFLNRA AVELAVEPKT LKPETEEYLS NLPWPGNVRQ
LENTCRWITV MASGREVHID DLPPELLSHA QENAPASNWE QALRQWTDQA LARGQSNLLD
IVVPAFERVM IESVLKHTAG RRRDAALLLG WGRNTLTRKI KELGMNVGGS DEEDGDEG
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