Gene Avin_45250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45250 
SymbolaroK 
ID7763393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4590865 
End bp4591383 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID643807373 
Productshikimate kinase 
Protein accessionYP_002801614 
Protein GI226946541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAAATG TAATCCTCGT GGGCCCGATG GGCTCGGGCA AGAGCACCAT CGGGCGTTTG 
CTTGCCAAAG AATTGCGGTT GGCGTTCAAG GATTCCGACA AGGAAATCGA GCAGCGTACC
GGCGCCGACA TTCCCTGGAT CTTCGACGTG GAAGGCGAGG CGGGCTTCCG CGAGCGCGAG
CAGGCGATGA TCGGTGAGCT TTGCGCCAGC GACGGCATCG TGCTCGCCAC CGGGGGCGGC
GCCGTGCTGC GCTCCGAGAA TCGCGCCGCC CTGCGTTCGG GCGGGCGGAT CGTTTACCTG
CACGCCTCGG TCGCCCAGCA ACTGGAGCGC ACTTCCCGCG ACCGCAATCG TCCGTTGCTG
CATTCCGCCG ATCCGGGACG GGTCCTGAGC GACCTGATGC TCGTCCGGGA CCCCCTGTAC
CGAGAGATCG CCGACCTGGT GGTGGAAACC GACGAACGCC CGCCACGCAT GGTCGTGGAG
GAAATCCTCG ACCGCCTGCA CACGTTGCCG CCACGGTGA
 
Protein sequence
MRNVILVGPM GSGKSTIGRL LAKELRLAFK DSDKEIEQRT GADIPWIFDV EGEAGFRERE 
QAMIGELCAS DGIVLATGGG AVLRSENRAA LRSGGRIVYL HASVAQQLER TSRDRNRPLL
HSADPGRVLS DLMLVRDPLY REIADLVVET DERPPRMVVE EILDRLHTLP PR