| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45240 |
|---|
| Symbol | aroB |
|---|
| ID | 7763392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4589710 |
|---|
| End bp | 4590813 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807372 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_002801613 |
|---|
| Protein GI | 226946540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGT TACAGGTTGA TCTCGGCGAG CGCAGCTATC CCATCTATAT TGGAGCCGGC
CTGCTGGACC GGGCGGAATG CATGGTTCCG CACCTGGCCG GTCGCCAAGT GGCGGTGGTC
ACCAACGAGA CCGTCGCGCC GCTCTATCTG GAGCGGTTGT CCCAAACCCT GGCCGGCCAT
GAGCTGACGC CCATCGTGCT GCCGGACGGC GAGGCCTTCA AGCACTGGGA AACCCTGCAG
AAGATTTTCG ACGGCCTGCT CGAGGCCCGG CACGACCGGC GCACCACCCT CATCGCCCTT
GGCGGGGGCG TCGTCGGCGA CATGGCGGGG TTTGCCGCCG CCTGCTACCA GCGCGGGGTC
GACTTCATCC AGATTCCGAC CACCTTGCTG TCCCAGGTGG ACTCCTCGGT CGGCGGCAAG
ACCGGCATCA ATCACCCGCT GGGCAAGAAC ATGATCGGCG CTTTCTATCA GCCGAAGGCC
GTGGTGATCG ATACCGCCAC GCTGGCGACC CTGCCGGAGC GGGAACTGTC CGCCGGCCTG
GCCGAGGTGA TCAAGTACGG CCTGATCTGC GACGAGCCCT TCCTCGGCTG GCTGGAAACC
CACATGGCGG CGCTTCGCGC CCTGGATGCG GCGGCCCTGA CCGAGGCCAT CGCCCGCTCC
TGCGCGGCCA AGGCGCGGGT GGTCGGTGTC GACGAACGCG AGTCGGGCGT GCGCGCCACC
CTGAACCTGG GGCACACCTT CGGTCATGCC ATCGAAACCC ACATGGGCTA TGGTGCATGG
CTGCACGGCG AGGCGGTGGC CGCGGGGTCC GTCATGGCCC TGGAGATGTC CCGGCGCCTC
GGCTGGCTCG GCGAGGCCGA GCGCGATCGC GGCATCCGCC TGCTGCAGCG CGCGGGACTG
CCCGTGGTGC CGCCGGCGCA GATGTCGGCG GACGACTTCC TCGGGCACAT GGCCGTCGAC
AAGAAGGTTC TGGGCGGCCG CCTGCGGCTG GTGCTGCTCA GGCGCCTGGG CGAGGCGGTG
GTGACTGGAG ACTTCCCGCA CGAGGCCTTG CAGGCCACCC TGGATACCGA TTACCGGACT
CTGATGGAAC AGATCAGTCA CTGA
|
|---|
| Protein sequence | MQTLQVDLGE RSYPIYIGAG LLDRAECMVP HLAGRQVAVV TNETVAPLYL ERLSQTLAGH
ELTPIVLPDG EAFKHWETLQ KIFDGLLEAR HDRRTTLIAL GGGVVGDMAG FAAACYQRGV
DFIQIPTTLL SQVDSSVGGK TGINHPLGKN MIGAFYQPKA VVIDTATLAT LPERELSAGL
AEVIKYGLIC DEPFLGWLET HMAALRALDA AALTEAIARS CAAKARVVGV DERESGVRAT
LNLGHTFGHA IETHMGYGAW LHGEAVAAGS VMALEMSRRL GWLGEAERDR GIRLLQRAGL
PVVPPAQMSA DDFLGHMAVD KKVLGGRLRL VLLRRLGEAV VTGDFPHEAL QATLDTDYRT
LMEQISH
|
|---|
| |