Gene Avin_44760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44760 
Symbol 
ID7763347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4530615 
End bp4531595 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID643807327 
ProductLipopolysaccharide 1,3-galactosyltransferase 
Protein accessionYP_002801568 
Protein GI226946495 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA CCGCCACAAG AAACTCGGAT GTCCTGCATA TCGCTTTCGG GGTGGACGAA 
AACTATTTGC GCCCCATGGG AATCACCATC GTCTCGATCA TCGAGAACAA TCCCGGGCTG
GAGCTGGTCT TCCATGTGTT CATTTCCAGC ATCTCATCGG CCAGTCGTGT GCGCCTGGAC
CGCTTGGAGC GGATGTTCGC GAGGCCGGTC AACCTGCATC TGGTCGATGA AATGCTGGAC
GTCAAGGACC CGGCTTCGGG CAAGGGGCAG GCCCATATCT CGAAGGCGGC CTACATCCGG
CTGCTGATTC CCGAGGCACT CAGGGACTTC ACGGACCGGG TGCTCTATCT CGACGCGGAC
ATCCTGTGCG TCGGCGATAT TTCCGGGCTG CTGCACCTGG ATATCGATGG GCGGACCGCC
GCCGTGATCC GCGACGCCGG CGCGGAGTCC AAGCGGGCCG GATTGGTCAA GAAAGGGCAG
ACGCTGGACA ACTATTTCAA TTCCGGGGTC TTGTATATCG ACATCCCGCG CTGGATCGAG
CGGGCCGTGA CGAGCCGGGC CCTGGAAAAG ATCGCCGATC CGGTCCTGGA CCTCCGCTAT
TCCGATCAGG ATGCCCTCAA CCTGGTGCTC GATGGCGACG TGCGCTTCAT CGACAAGGGC
TGGAATCATC AGTACGGTCT GACTGGCAAG CTGAAAAAGG GCAGGGTCGG CATGGATGTT
CCGTCGGATA CCAAGTTCGT CCATTTCATC GGGCCGATGA AGCCCTGGCG CAGTTGGAAC
CCTCATCAGT CGAAAGAACT GTTCCTCAGG TACCAGGCCC TGTCGCCCTG GGCCGGGGAG
GCGCTGGACG ACAATTTCTC CCCTCGGGAG ATCTACGTCT ATTCGCGCTT CATGTACCGA
TCGATGTTCC AGCAGGGACG CTGGCTGAGC GGGCTGATCT GGTACGGTAA ATTCCTGCAC
AGGAAGCACA AGGAGGGCTG A
 
Protein sequence
MSDTATRNSD VLHIAFGVDE NYLRPMGITI VSIIENNPGL ELVFHVFISS ISSASRVRLD 
RLERMFARPV NLHLVDEMLD VKDPASGKGQ AHISKAAYIR LLIPEALRDF TDRVLYLDAD
ILCVGDISGL LHLDIDGRTA AVIRDAGAES KRAGLVKKGQ TLDNYFNSGV LYIDIPRWIE
RAVTSRALEK IADPVLDLRY SDQDALNLVL DGDVRFIDKG WNHQYGLTGK LKKGRVGMDV
PSDTKFVHFI GPMKPWRSWN PHQSKELFLR YQALSPWAGE ALDDNFSPRE IYVYSRFMYR
SMFQQGRWLS GLIWYGKFLH RKHKEG