Gene Avin_44670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44670 
Symbol 
ID7763338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4519982 
End bp4520623 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID643807318 
ProductISRm2011-2 transposase-like protein 
Protein accessionYP_002801559 
Protein GI226946486 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.535803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTTT CTCGACCGGC ACGCCATGAC GTTCAAAAAA AGACCGCGCA TGCAGCCGAG 
CAGCAACGGC CGGACGTCCA GGCAGCCCGA CAGGGATGGA TCGAGGAGCA GTCCGGTTTC 
GATTGGCGCA AGCTGATCTT CGTCGACGAA ACCGCCGCTT CGACGAACCT GGCCCGCCTG 
CGGGGCTGGG CCCCTCGCGG CGAGCGCTGC CGGGCCGCGA TCCCCCACGG CCACTGGAAA 
ACCACGACCT TTACCGCCGG CCTGCGGGTG GATGGCCTGA GCGCGCCGCT GGTGCTCGAT 
GGCGCCATGA ACGGCCCGGT CTTCCTGGCC TATGTCGGGC AGGTCCTGGT ACCCGAGCTG 
ACGCCCGGCG ATATCGTGGT GATGGACAAC CTGCCGGCCC ACAAGGTGGC GGGGGTACGC 
CAGGCCATCG AAGGCGCAGG AGCCACCCTG CGCTACTTGC CACCCTATAG CCCCGACCTG 
AACCCGATCG AGATGGCCTT CTCCAAGCTC AAGGCACTGC TGAGAAAGGC GGCGGCGCGG 
ACCGTGCCGG AGCTGTGGCA GAGCATTGGC GAGGCGATTG CGCAGTTCTC TGCACAGGAC 
TGCAGGCACT ACTTCGAGGC AGCCGGATAT GAATCGGGAT AA
 
Protein sequence
MDVSRPARHD VQKKTAHAAE QQRPDVQAAR QGWIEEQSGF DWRKLIFVDE TAASTNLARL 
RGWAPRGERC RAAIPHGHWK TTTFTAGLRV DGLSAPLVLD GAMNGPVFLA YVGQVLVPEL 
TPGDIVVMDN LPAHKVAGVR QAIEGAGATL RYLPPYSPDL NPIEMAFSKL KALLRKAAAR 
TVPELWQSIG EAIAQFSAQD CRHYFEAAGY ESG