Gene Avin_43750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43750 
Symbol 
ID7763248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4421757 
End bp4423091 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content68% 
IMG OID643807230 
Producthypothetical protein 
Protein accessionYP_002801471 
Protein GI226946398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.675363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGA CCCTGCAATG CACCCTGGGC GCCGGCGCCC TGGCGCTCGC CCTCCAGGCC 
GCGCCGCCGG CCCGGGCCGC CGACCTCGAA CAGTACATTC CGCTGCCGAG CTTTCGCGTC
GGCCCCTACG CCTCCAGCGG CATCCCGCTG TTCGACGGCA TCATCGACTA CCTGACCTAC
GTCAACGAGA CCCAGGGCGG CATCAACGGC GTGCGGCTGA CCTGGAGCGA GTGCGAGACC
GGCTGGCTGG CCGACAAGGG CGTGGAGTGC TACGAGCAGA TGAAGAACGG CCGCAACGGC
TCACCCACGC CGTTCTTCTT CCCGCTGTCC GGGCCCATCG CCGCGGCGCT GGCCGAGCGC
ACCGAGCAGG ACCGGATTCC GCTGGTGACC ATCGGCTACG GCATCACCGA TGCCACCGCC
GGCGCGGTCT ACCCCTACAA CTTCCCGATC ATGGCCAACT TCTACAGCCA GTCGTCCTCG
GTGGTGAACT ACATCGCCCA GCTCGAGGGC GGGGCGGACA AGCTCAAGGG CAAGAAGATC
GTCACCGCCT ACAACGACTC GCCGCCCGGC CGGGAAACCA TCGCTTCGAT GAAGCTGTTG
GCCGAGAAGT ACGGCTTCGA GGACATCCAG GTGCCGATCC CGCTGCCCGG CAACGAGCAG
ACCGCGGTGT GGCGCGGCAT CCGCCAGCAC AAGCCGGACT ACGTGTTCCT GCGCGGCTGG
GGGGTGATGA CGCCGGTGGC GATCAAGACC GCGGTGCGTT TCGGCCTGCC CGCCGAGCGG
CTGATCGGCG ACATCTGGTC GGCCTCGGAA GAGGACGTGA TTCCCGCCGG CGCCTCGGCC
AAGGGCTACA AGGCGATCAC CCCGAACCCC AGCGGCACCG ATTTCCCCGT ACTGCAGGGC
ATCCGCAAGG CGGTCGTCGA CGCCGGCAAG AGCAGCCTGC GCGACAAGAA CAGCTTCGGC
AGCGTGTTCT ACAACTCCGG CGTGATGCAG GGAATCCTGA TGGTCGAGGC GCTGCGCAAG
ACCCAGGAGA AATACGGCGT CAAGGCCCTG AACGGCGAGG AAGCCCGCTG GGGCTTCGAG
AACCTGAGCC TGGACGAGCC GCGCATCGCC GCCCTCGGCG CCACGGGCCT GCTGCAACCG
CTCGAGGTCA CCTGCGACGA CCACGAGGGC GGCGGTTCGG TGCGCGTGCA GCAGTGGGAC
GGACAGAAAT GGACGGTGGT CAGCGACTGG GTGGTCGCCG AGCGCGACCT GCTGCGTCCG
CTGATCGACG CCGGCGCCGC CCGCCACGCC AAGGAGAAGG GCATCGCCCC GCGCGACTGC
GGCCGGCCCT TGTAG
 
Protein sequence
MRKTLQCTLG AGALALALQA APPARAADLE QYIPLPSFRV GPYASSGIPL FDGIIDYLTY 
VNETQGGING VRLTWSECET GWLADKGVEC YEQMKNGRNG SPTPFFFPLS GPIAAALAER
TEQDRIPLVT IGYGITDATA GAVYPYNFPI MANFYSQSSS VVNYIAQLEG GADKLKGKKI
VTAYNDSPPG RETIASMKLL AEKYGFEDIQ VPIPLPGNEQ TAVWRGIRQH KPDYVFLRGW
GVMTPVAIKT AVRFGLPAER LIGDIWSASE EDVIPAGASA KGYKAITPNP SGTDFPVLQG
IRKAVVDAGK SSLRDKNSFG SVFYNSGVMQ GILMVEALRK TQEKYGVKAL NGEEARWGFE
NLSLDEPRIA ALGATGLLQP LEVTCDDHEG GGSVRVQQWD GQKWTVVSDW VVAERDLLRP
LIDAGAARHA KEKGIAPRDC GRPL