Gene Avin_43260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43260 
Symbollldp 
ID7763199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4367732 
End bp4369417 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID643807181 
ProductL-lactate permease, Lldp 
Protein accessionYP_002801422 
Protein GI226946349 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0650163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCT GGCAACAGAT CTATACCCCG CTCGGCGGTC TGGGAATATC GGCGCTGGTG 
GCGCTGATCC CGATCGTATT CTTCTTCCTC GCCCTGGCCG TATTCCGCAT GAAGGGCTAT
GTGGCAGGCA CCATCACCCT GCTCCTCTCG ATCGTCACCG CCGTCTCGGT GTTCGGCATG
CCGCTCGACA TGGCCTTCGC CGCGGCCGGC TACGGCTTCG CCTATGGCCT CTGGCCGATC
GCCTGGATCA TCGTCGCGGC GGTGTTCCTC TACAAACTCA CCGTCAAGAG CGGCCAGTTC
GAGGTGATCC GCAGCTCGGT GCTGTCGATC ACCGACGACC AGCGCCTGCA GGTGCTGCTG
ATCGGCTTCT CCTTCGGCGC CTTCCTCGAA GGCGCGGCCG GTTTCGGCGC CCCGGTGGCG
ATCACCGGCG CCCTGCTCGT CGGCCTGGGT TTCAACCCGG TCTACGCCGC CGGCCTGTGC
CTGATCGCCA ACACCGCGCC GGTGGCCTTC GGCGCCCTGG GCGTGCCGAT CATCGTCGCC
GGCCAGGTGA CCGGCATCGA CGCCTTCGAC ATCGGCGCCA TGGCCGGCAG GCAACTGCCC
CTGCTGTCGG TCATCGTGCC CTTCTGGCTG GTGGCCATCA TGGACGGCTG GAAAGGTGTC
CGGGAAACCT GGCCGGCCGC GCTGGTCGCG GGCTCCAGCT TCGCCGTCAC CCAGTACTTC
ACCTCCAACT ACATCGGCCC GGAACTGCCG GACATCACCT CGGCGCTGGT CAGCATCGTC
TCCCTCACCC TGTTCCTCAA GGTCTGGCAT CCGAAGACCG CCGAGGCCGG CGAGGTGCTC
GCCGGGGCGG GCGGCTCGGC CGTGCTCGGC GGCTTCGGCG GCCCGCGCAG CGCTACACCC
TCGCCTTACA GCCTCGGCGA AATCCTCAAG GCCTGGTCGC CGTTCCTGAT CCTCACCGCC
CTGGTCACCA TCTGGACGCT GCAACCCTTC AAGGACCTGT TCGCCCCCGG CGGACTCCTG
GAATCGCTGG TCTTCAAGAT CGCCATCCCC CACCTCGACC AACTGGTGAT CAAGGCCGCT
CCCCTGGTGG CCGAGCCGAC CCCCATCGCG GCGGTATACA AGTTCGACCC GTTCTCCGCG
GGCGGCACGG CGATCCTCTT CTCGGCGCTG CTCTCGATGT TCATCCTGGG CGTCGGCCCG
AAGGTCGGCC TGCGCACCTT CGGCGAGACC CTGGTCGAAC TGAAGTGGCC GATCCTCTCC
ATCGGCATGG TGCTGGCCTT CGCCTTCGTC ACCAACTACT CGGGCATGTC CAACACCCTG
GCGCTGATAC TGGCGGGCAG CGGCGCGGCC TTTCCCTTCC TGTCGCCCTT CCTGGGCTGG
CTGGGCGTGT TCCTGACCGG TTCGGACACC TCCTCCAACG CCCTGTTCTG CTCGCTGCAG
GCCACCACCG CGCAGCAGAT CGGCGTCGAC GAAACCCTGC TGGTGGCGGC CAACACCAGC
GGCGGCGTGA CCGGCAAGAT GATCTCGCCG CAGTCGATCG CCGTGGCCTG CGCCGCGACC
GGCATCGTCG GCCGCGAGTC GGACCTGTTC CGCTTCACCC TGAAGCACAG CTTCCTCTTC
GCGCTGATCA TCGCCCTGAT CACCCTGGCG CAAGCCTATG TCTTCACCGG CATGCTGGTG
AACTGA
 
Protein sequence
MQTWQQIYTP LGGLGISALV ALIPIVFFFL ALAVFRMKGY VAGTITLLLS IVTAVSVFGM 
PLDMAFAAAG YGFAYGLWPI AWIIVAAVFL YKLTVKSGQF EVIRSSVLSI TDDQRLQVLL
IGFSFGAFLE GAAGFGAPVA ITGALLVGLG FNPVYAAGLC LIANTAPVAF GALGVPIIVA
GQVTGIDAFD IGAMAGRQLP LLSVIVPFWL VAIMDGWKGV RETWPAALVA GSSFAVTQYF
TSNYIGPELP DITSALVSIV SLTLFLKVWH PKTAEAGEVL AGAGGSAVLG GFGGPRSATP
SPYSLGEILK AWSPFLILTA LVTIWTLQPF KDLFAPGGLL ESLVFKIAIP HLDQLVIKAA
PLVAEPTPIA AVYKFDPFSA GGTAILFSAL LSMFILGVGP KVGLRTFGET LVELKWPILS
IGMVLAFAFV TNYSGMSNTL ALILAGSGAA FPFLSPFLGW LGVFLTGSDT SSNALFCSLQ
ATTAQQIGVD ETLLVAANTS GGVTGKMISP QSIAVACAAT GIVGRESDLF RFTLKHSFLF
ALIIALITLA QAYVFTGMLV N