Gene Avin_43060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43060 
Symbol 
ID7763179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4344561 
End bp4345337 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID643807161 
ProductGntR family transcriptional regulator 
Protein accessionYP_002801402 
Protein GI226946329 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.145133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCG GTCCGGTCCG ACAGCGCCGT CTGTCGGACG ATATCGTTGC GCGCCTGGAG 
GCGATGATTC TCGAAGGCTC GCTCAAGGCG GGCGAGCGTC TGCCGGCAGA GCGTGCACTG
GCCGAGCAGT TCGGCGTGTC GCGCCCCTCG CTGCGCGAGG CGATCCAGAA GCTGGCGGCG
CGCGGCCTGC TGGTCAGCCG GCAGGGCGGG GGCACCTATG TGGCCGAGTC GTTGGGCTCG
ACCTTCAGCG ATCCGTTGCT GCAGTTGCTG GAAAGCAGTA CCGAGGCGCA GCGCGACTTG
CTGGAATTCC GGCATACCCT GGAGGGTGCC TGTGCCTTCT ATGCGGCACT GCGCGCCACG
CCGCTGGACC ATGAGCGCCT GCGCGCCGCC TTCGAGCGCT TGCAGCGTTG TTACGACTCC
CCGGTGCCCG GCGGCGGCCC CGAGGAAGGA CTGGCCGATG CGCATTTTCA TCTGGCGATC
GCCGAGGCCA GCCACAATGC CGTGCTGCTG CACACCATCA AGGGGCTGTT CGATCTGCTC
AGACGCAATG TGGTGACCAA TATCGGCGGC ATGTATGCCC AGCGCGGCGA AACCCGCGAC
ATGCTGTTGC AGCAGCACCG CGAACTGTAC GAGGCGATCG TCGGAGGGCG GGCCGAGGAG
GCGCGGGAAG TGTCCAGCCG GCATATCCAC TATGTGCAGG AGGTGCTGGC CGAGGTGCAG
CGGGAAGCGC AGCGCGAGGC GCGGGCGCGC CGCCGTCAGG GATTGGCCGA AAGCTGA
 
Protein sequence
MGFGPVRQRR LSDDIVARLE AMILEGSLKA GERLPAERAL AEQFGVSRPS LREAIQKLAA 
RGLLVSRQGG GTYVAESLGS TFSDPLLQLL ESSTEAQRDL LEFRHTLEGA CAFYAALRAT
PLDHERLRAA FERLQRCYDS PVPGGGPEEG LADAHFHLAI AEASHNAVLL HTIKGLFDLL
RRNVVTNIGG MYAQRGETRD MLLQQHRELY EAIVGGRAEE AREVSSRHIH YVQEVLAEVQ
REAQREARAR RRQGLAES