| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42570 |
|---|
| Symbol | |
|---|
| ID | 7763132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4289997 |
|---|
| End bp | 4291598 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002801355 |
|---|
| Protein GI | 226946282 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2187] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0138648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTT CCGCCCGACA GCCTCGACAA GGACTGACCG TGAGCCAAGC CCTGATCAAC
GCCCTGCAGA ACCCCGCGCT CTATCCGCAC GCGGTGACTG AGTTCAAGGT CATCGAGACC
CACATCTCCT GGGTCCTGCT CACCGGCCCC TATGCCTACA AGTTCAAGAA AGCCGTCGAC
TTCGGCTTCC TCGACTTCAC CGGCCTGGCG GCACGCAAGC ACTTCTGCGA GGAAGAGGTG
CGCCTGAACC AGCGCCTGAC CCGCGACCTT TACCTCGAAG TCCTGCCGAT CACCGGCAGC
GAGAACGCCC CGCAACTGGC CGGCGACGGT CCGGTCATCG AATACACGGT CAAGATGCGC
CAGTTCCCGC AGAGCCAGTT GCTCGGCGAA ATGCAGACCC GCGGCGAACT CGCCCCCGAG
CACATCGACG CCCTGGCGGA ACGGATCGCC AGCTTCCACC TGCAGGCGCC GAAGGTGCCG
GCGGAACATC CGCTGGGCGG AGCGGAAGCC GTGATGAGCC CGGTGCGGCA GAACTTCGAG
CAGGTTCGCC CGCTGCTCGC CGAACCGGCC GACCTGCAGC AGCTCGATGC CCTTGAGGCC
TGGGCCGAGA CCAGCTTCGA GCGCCTGCGG CCGCTGCTCG AGCAGCGCAA GGCCGACGGC
TTCATCCGCG AATGCCATGG CGACCTGCAC CTCGGCAACG CCACCCTGCT CGACGGGCAG
GTCGTGCTGT TCGACTGCAT CGAGTTCAAC GAGCCGTTCC GCCTGATCGA CGTCGTGTGC
GACGCCGCCT TTCTCGCCAT GGACCTGGAG GACCGCGGCC TCAAGGGGTT CTCCCGGCGC
TTCGTCAGCC GCTGGCTGGA GTTGACCGGC GACTACGCGG CCCTGCCGCT GCTGAACTTC
TACAAGGCCT ACCGCGCCAT GGTCCGCGGC AAGGTCAACC TGTTCCGCCT GGCCCAGGAA
GAGAGCGACG AGCGACGCGC CGCCATCCTC CGGCAGTACC GCAACTACGC CAGCCTGGCG
GAACGCTACA GCGCCATTCC CTCGTGTTTT CTGGCCATCA CCCACGGAGT GTCCGCCGTC
GGCAAGAGCT ATGTCGCCCA GCGCCTGACG GAAGAGTTCG GTGCCATCCG CCTGCGTTCG
GACGTGGAAC GCAAGCGCCT GTTCGGCGAA CAGCCGGCGG CCGATCGGGA GCGGCTGACC
AGCGGTATCT ACAGCGCACA GGCCAGCACG GCGACCTACG AACACCTGCA TCGGCTGGCT
GCCGGCGCCC TGCAGGCAGG CTTTCCGGTG GCGATCGACG CCACCTACCT GAAGGAGGCA
CAACGCGCGG CCGCCAGGCA GGTCGCCGAG AACAACGGTG CCCCCTTCCT GATCGTCGAC
TGCCAGGCCC CCGAAGCCCT GATCGCCGAA TGGCTCACCG AGCGTCGGGC TGCCGGGAAG
GATCCGTCCG ATGCCACGCT GGAGGTCATC CGGGCGCAAC AGGCCGGCCG CGAACCCCTG
ACCGAGGCCG AGCAGCAACG CAGCCGACGG GTCGATACCC ACCTTACCGC CAGTCTCGAC
GATCTGGTGG CGCGCATGCG CAATCACCTC CCCCACCTTT GA
|
|---|
| Protein sequence | MRLSARQPRQ GLTVSQALIN ALQNPALYPH AVTEFKVIET HISWVLLTGP YAYKFKKAVD
FGFLDFTGLA ARKHFCEEEV RLNQRLTRDL YLEVLPITGS ENAPQLAGDG PVIEYTVKMR
QFPQSQLLGE MQTRGELAPE HIDALAERIA SFHLQAPKVP AEHPLGGAEA VMSPVRQNFE
QVRPLLAEPA DLQQLDALEA WAETSFERLR PLLEQRKADG FIRECHGDLH LGNATLLDGQ
VVLFDCIEFN EPFRLIDVVC DAAFLAMDLE DRGLKGFSRR FVSRWLELTG DYAALPLLNF
YKAYRAMVRG KVNLFRLAQE ESDERRAAIL RQYRNYASLA ERYSAIPSCF LAITHGVSAV
GKSYVAQRLT EEFGAIRLRS DVERKRLFGE QPAADRERLT SGIYSAQAST ATYEHLHRLA
AGALQAGFPV AIDATYLKEA QRAAARQVAE NNGAPFLIVD CQAPEALIAE WLTERRAAGK
DPSDATLEVI RAQQAGREPL TEAEQQRSRR VDTHLTASLD DLVARMRNHL PHL
|
|---|
| |