Gene Avin_42470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42470 
SymbolpqiA 
ID7763123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4274952 
End bp4275611 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID643807098 
ProductParaquat-inducible protein A 
Protein accessionYP_002801346 
Protein GI226946273 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGATT CGAGTCGATC CCATGACTTG GGGGAGCTTT CCCTGGACAA ACTGGTCGCC 
TGCCATGAGT GCGACCTGCT GATGCTCAAG CCTGAACTCG CGCCGAGCGA GCGCGCCGAA
TGTCCCCGCT GTGGTTTCGA GTTGTTCAGC TACCAGCCCC ATATGCTGGG GCGCAGCCTG
GCCCTGGTCA TCGCCGCCTT GTTGCTCTAT GTGCCGGCCA ACTTCCTGCC GATCCTACAG
CTTCGCCTTC TGGGCCAGAC GACCGAGGAC ACTGTATGGA GCGCCGTCGC CGCGCTCTAT
GAAAGCGATC TGCAGGGCAT TGCGGTGGTC GTCTTCCTCT GCAGCATGGG AATACCGTTG
CTCAAGCTGC TCTGCCAACT GGTCGTCTTG CTGAGCATAC GTTGGGATGT GGGGCGTGGT
TATGGTCTGC TGCTGTATCG CATCTACCAC CATCTGCGCG AATGGGGAAT GCTGGAGGTT
TATTTCATGG GCATCCTGGT TTCGATCGTC AAGCTGCTTT CACTGGCCGA TCTGGCGGTT
GGAACGGGAT TGGCCTGTTT CATCTGCCTT CTGCTGGTGC AGGTCTGGCT TGAGATCACC
ATGTCTCCGC ACCAGGTATG GGAAGCCTTG TCCCGGGGGA GGGCGCATGC GAGCCATTGA
 
Protein sequence
MHDSSRSHDL GELSLDKLVA CHECDLLMLK PELAPSERAE CPRCGFELFS YQPHMLGRSL 
ALVIAALLLY VPANFLPILQ LRLLGQTTED TVWSAVAALY ESDLQGIAVV VFLCSMGIPL
LKLLCQLVVL LSIRWDVGRG YGLLLYRIYH HLREWGMLEV YFMGILVSIV KLLSLADLAV
GTGLACFICL LLVQVWLEIT MSPHQVWEAL SRGRAHASH