Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42400 |
Symbol | otsB |
ID | 7763116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4267609 |
End bp | 4268370 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643807091 |
Product | trehalose-phosphatase |
Protein accession | YP_002801339 |
Protein GI | 226946266 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGGTC AATGCCCCAC CTGTGCGCAG GACCTGCAAG GCTGCGCCTT CTTCTTCGAT GTGGACGGAA CGCTTGCCGA AATACAGCCC CGTCCCGAGC TGGTATTCAT CCCCGCCGCC ATACTCGCCG CCCTTGGCCG GCTCCAGACC GTCGGAGTAC CGGTCGCCGT GATCTCCGGT CGTCGGCTGG CGGATCTCGA TCAGTTGTTC GAGCCGCTGC GCCTGCCGGC CGCCGGCGTG CACGGCGCCG AGCGCCGCGG CGCCGACGGC CGGCTGCGGC AACTGAACCT GGATCGGGAG GCCCTGCGCC GGGTCGGGGA CGAACTGTTC CAGGCCTGCG CCCGGTACCC CGGGTTGCAT CTGGAAAACA AGGGACTGGC CTTCGCGCTG CATTTCCGTC TGGCGCCCGA ACTGGAGGCG GTCGCGCGCG GCCTGGCCGA GGACTTCATC CGCCGCTACC CCGCGCTGCT GACCCTGCAG CCGGGCAAGT GCGTGTTCGA ACTCAAGCCG CGCGGCGCCA GCAAGGGGGA GGTGATCCGC GAATTCATGC GCGAGCCGCC GTTCGGCGGC CGGGTGCCGG TATTCATCGG CGACGACCTC ACCGACGAGG CCGGTTTCCA GGCGGTCAAC GCCCTGGGTG GGCATTCGTT CAAGGTAGGG CCGGGCGAGA CGGCCGCTCG ACAGCGGCTG GACTCCGTCT CGGCGGTGGA AAAATGGCTG GACGCTCTGG TCCGGCCCCT CAAACCGGAG GTTTATCCAT GA
|
Protein sequence | MNGQCPTCAQ DLQGCAFFFD VDGTLAEIQP RPELVFIPAA ILAALGRLQT VGVPVAVISG RRLADLDQLF EPLRLPAAGV HGAERRGADG RLRQLNLDRE ALRRVGDELF QACARYPGLH LENKGLAFAL HFRLAPELEA VARGLAEDFI RRYPALLTLQ PGKCVFELKP RGASKGEVIR EFMREPPFGG RVPVFIGDDL TDEAGFQAVN ALGGHSFKVG PGETAARQRL DSVSAVEKWL DALVRPLKPE VYP
|
| |