Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42090 |
Symbol | |
ID | 7763087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4236725 |
End bp | 4238008 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643807062 |
Product | outer membrane porin, OprD family |
Protein accession | YP_002801311 |
Protein GI | 226946238 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.696381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTCTT CCATTCGAAC CCTTGCCGGC AAGGGTGGGG CGGCGTGCGC CCTGTTCGTT CTGGGCGTTC CGGCCGACGC CGGCTTCATC GAGGACAGCC AGGGCAGCCT GACCCTGCGC AACTTCTACT TCGACCGCGA CTACAAGGGC GAATCCAACG TCTCCGCGCG CCGCGAATGG GCGCAGGGTT TCATCCTCAA CCTCAAGTCC GGCTTCACCG AGGGGCCGAT CGGCTTCGGC CTCGACCTGC AGGGCATGCT CGGCGTCCAG CTCGACTCCT CGCGCGACCG CGCTGGCACC GGCCTGCTGC CGGTCGAACG CGGCAGCGGC GAAGCCCAGG ATTCCTACGC CGAACTCGGC ATCACCGGCA AGATCCGCTA CTCGAAGACC GAGCTGCACC TCGGCACCGT GATGCCGCGC CTGCCGATCC TGATCAGCAG CCCGGCCCGG ATGCTCTGGC AGACCTTCAA GGGCGGCCAC CTGCGTTCCA CCGACATCCC CGGCCTGAGC CTGCAGGCCG GCTACCTGAA CCGCATGAAC CAGCGCGACT CCACCGATTA CCAGAAGATC GCCATCGCCG GCCCCAACGG CCGCTTCGAC GGCACGGCGG AGTCCGACGA GTTCCTCTTC CTCGGCGGCG ACTACGCGCT GGGCAAGAAC CTGACCCTGA GCTACTGGCA CGCCCGGCTG GACGAGATCT ACCAGCAGAA CTACCTGGGC GCGATCCACC AGCTCAAGTG GGGGCCGGGA GAATTCAAGA CCGACTTCCG CTGGTTCCTC AGCGACGAGG AGGGCGAGGG CAAGGCCGGC TCGGTGGACA ACCAGTACGT GGGCCTGAAC TTCGGCTACA AGCTGGGCGG GCACCGGCTG ACGGTGGGCG GTGCGCTGTC CAGCGGCGAC TCGGCGATGC CGTACATCGC CGGTTCGGAG CCGCACCTGA TTTCCGAATA CGCGATCAGC TCGGAATTCC TCAACGCCGA CGAACACTTC TGGCACGTGC GCTACGAATA CGACTTCGCG GCGGCGGGGC TGCCGGGGCT GATCGGCGTG GCGCGCTTCA TGAAGGGGAC CAATGCCGAG CTGCCGGAAC GCCTGGGCGG TGGCAACCGG GAAGAGACGG AGCGCTACCT GGAACTGTCC TACGTGGTGC AGTCGGGCCC GCTGAAGAAC GTGGCGCTGC GCCTGCGCAA CTCGCGCTAC CAGAACAGCT TCGCGCCGAA CGCGACGATG CGCGACGACA ACGAGACGCG GATCAACGTC GATTACACCT GGAAGCTCTG GTAG
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Protein sequence | MGSSIRTLAG KGGAACALFV LGVPADAGFI EDSQGSLTLR NFYFDRDYKG ESNVSARREW AQGFILNLKS GFTEGPIGFG LDLQGMLGVQ LDSSRDRAGT GLLPVERGSG EAQDSYAELG ITGKIRYSKT ELHLGTVMPR LPILISSPAR MLWQTFKGGH LRSTDIPGLS LQAGYLNRMN QRDSTDYQKI AIAGPNGRFD GTAESDEFLF LGGDYALGKN LTLSYWHARL DEIYQQNYLG AIHQLKWGPG EFKTDFRWFL SDEEGEGKAG SVDNQYVGLN FGYKLGGHRL TVGGALSSGD SAMPYIAGSE PHLISEYAIS SEFLNADEHF WHVRYEYDFA AAGLPGLIGV ARFMKGTNAE LPERLGGGNR EETERYLELS YVVQSGPLKN VALRLRNSRY QNSFAPNATM RDDNETRINV DYTWKLW
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