| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41800 |
|---|
| Symbol | |
|---|
| ID | 7763060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4214463 |
|---|
| End bp | 4216310 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643807035 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002801284 |
|---|
| Protein GI | 226946211 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATT TTAATGTTGC TATAATTGGT GGCGGCCCTC GAGGCTTAAA CGTTTTGGAG
AGATTTATTG AAATAACAAA TAAAAATAAA ATGTCGTCAA GATTGAAAGT GCATTTTATT
GATCCTGGGA TACCAGGCGA AGGTTGTCAT CCTTCCAGTC AGCCAGATCA CTTGTTGGTA
AACACTGTTT CATCTCAGGT GACTATATAT GCCCCAGATA GTATAGCGCA CAGAGACAAC
GGATTATCTT TTATTGATTG GGCTGTCTCA AAAAATTATC GTAAAATTGA TGGCAAATAT
AAAAAAGGTT GTGGCGGTAA TCAATTGACC GATATGGATT ATTTGCCTAG AAGCATACTT
GGAGAATATC TGGGTATGTT TTTCAATCAT CTGCTTTCAC TATTGCCAGA AAATGTGGAT
GTTATTGTTC ACAAAGCAAA TGCGATAGAT ATTTCCAACG AAAATCCATA TAAGATTGAG
CTTGATAATA ACAATATACT GGATGCTGAC TTTATATTTC TGACCACAGG ACATGTTTAC
AGAAAACCTT CAAAGGTCGA TCAAGGCTTT GCTGATTTTG CGAAAAATCA TTGCCACAGA
AATCGAAATT TGGCTTACTA TCAAACACCT TATCCCATCG GTAACCTGGA TTGCATTTCT
AGTAATGCAA CTGTGCTGAT ACAAGGTTTT GGTCTTACTG CTCATGACAC CATTTCTGCT
CTGACTATTG GGCGTGGTGG CCATTTTGAG GAGGACGGGA ATAAGCTTCG CTATTGTGCT
TCTGGTTCAG AGCCAGATCT CCGACTCGTC TCAAGGCAGT GTTTGCCGTT TGCTGCACGA
GGTACTAATC AGAAAGGTTT GACTGGACGA CATCAAAGTC AGTTCTTCAC CTTAGAAGCT
ATTACTAAAC TTAGGCAACA AGCTATTCAG AAAACAGGGG ATTATCGCCT AAACTTTCAG
AAAGATGTTA TGCCGTTAAT TCTCAAAGAA GTAATTTACG CCTGGAGGTG TGCGAAGTTT
GCTAAGCGAG TGGATCCAAG GGGCTTTCAG CCCACAAAAG ACGAAATAAA TTCGATCAAC
AAAATTTTGT GGCCATTGGA GGGAAATAGT TTTTCTGATT TCTCTAACTA TAGAGCCTTC
TTTAAAAAAA TGGTCGATGA GGATCTACTG GAAGCAGTAA AGGGCAATAT GAATAGTGCT
GTGAAAGCTT CAACTGATGT GTTGCGTGAT ACAAGAGATG TGTTGCGCAG TGTCATTGAG
TTTGGTGGAT TGTTACCGGA GTCTCACAAA TATTTTATTG AGCACTTCAA CCCTATCATC
AATCGTGTTT CCTTTGGGCC GCCACTTCGT CGTGTCAAGG AGGTTCAAGC GCTGTTTGAA
GCAGGTGTTC TGGATCTGGC TGGTGGACCA GGAGCAATGG TCATTACCAA TGAGTCTACA
TCTGAATATG AGGTTATCAC AAAGTTTGCG AATAAAATCT ACAAGCAGAA AGCAGACATT
GTTATAAGTG CACGTCTTGA TGGCTATTCA CCTTTAACAG ATTCAAGTCG ATTAACAGAA
AATTTATTGA AACGTAGTCT TATCAGACCT TGGATGAACG GTGATTATCA TCCTGGCGGT
GTAGATATAG ATAAACATAT GCACCCGATT GATAGTTCTG GAAAACCACA GCCTCGGCTA
TGGGCTATCG GATTTCCAGT AGAGGGAGCT CATTACTACA CCCATGCCTT ACCTCGGCCT
CATGTTGACT CCCGTCAAAT AACTGAAGCT GAAAATTGCG TCGTGGATTG CTTAAAGCAA
ATTACTGAAA TTCATAAGAG ATCTCAACAA TTATTGGAAA CCCTGTAA
|
|---|
| Protein sequence | MNNFNVAIIG GGPRGLNVLE RFIEITNKNK MSSRLKVHFI DPGIPGEGCH PSSQPDHLLV
NTVSSQVTIY APDSIAHRDN GLSFIDWAVS KNYRKIDGKY KKGCGGNQLT DMDYLPRSIL
GEYLGMFFNH LLSLLPENVD VIVHKANAID ISNENPYKIE LDNNNILDAD FIFLTTGHVY
RKPSKVDQGF ADFAKNHCHR NRNLAYYQTP YPIGNLDCIS SNATVLIQGF GLTAHDTISA
LTIGRGGHFE EDGNKLRYCA SGSEPDLRLV SRQCLPFAAR GTNQKGLTGR HQSQFFTLEA
ITKLRQQAIQ KTGDYRLNFQ KDVMPLILKE VIYAWRCAKF AKRVDPRGFQ PTKDEINSIN
KILWPLEGNS FSDFSNYRAF FKKMVDEDLL EAVKGNMNSA VKASTDVLRD TRDVLRSVIE
FGGLLPESHK YFIEHFNPII NRVSFGPPLR RVKEVQALFE AGVLDLAGGP GAMVITNEST
SEYEVITKFA NKIYKQKADI VISARLDGYS PLTDSSRLTE NLLKRSLIRP WMNGDYHPGG
VDIDKHMHPI DSSGKPQPRL WAIGFPVEGA HYYTHALPRP HVDSRQITEA ENCVVDCLKQ
ITEIHKRSQQ LLETL
|
|---|
| |