Gene Avin_41550 details

Gene Information

• Locus tag: Avin_41550
• Symbol: ychF
• ID: 7763037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4189118
• End bp: 4190218
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643807013
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: YP_002801262
• Protein GI: 226946189
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATTCA ACTGCGGCAT CGTCGGCCTG CCCAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCCCTCACCA AGTCCGGCAT CGCCGCCGAG AACTTCCCCT TCTGCACCAT CGAGCCGAAC 
AGCGGCATAG TGCCGATGCC CGATCCGCGC CTGGACGCCC TCGCCGCCAT CGTCAAGCCC 
GAGCGCGTGC TGCCGACCAC CATGGAGTTC GTCGACATCG CCGGCCTGGT GGCGGGCGCC 
TCCAAGGGCG AGGGCCTGGG CAACAAGTTC CTGGCCAACA TCCGCGAGAC CGACGCCATC 
GCCCACGTGG TGCGCTGCTT CGAGGACGAC AACGTCATCC ACGTCTCCAA CTCGGTCGAT 
CCCAAGCGCG ACATCGAGAT CATCGACCTC GAACTGATCT TCGCCGACCT CGACAGCTGC 
GAGAAGCAGT TGCAGAAGGT CGTGCGCAGC GCCAAGGGCG GCGACAAGGA AGCCTTGGCG 
CAAAAGTCCC TGCTGGAAAA GCTGATTCCG CACTTCAGCG AAGGCAAGCC GGCCCGCTCG 
CTGATGAGGG GCATGGACGA CGAGCAGAAG CGCATCGTTC GCGGCTTCCA CCTGCTCACC 
AGCAAGCCGG TGATGTACAT CGCCAACGTC GCCGAGGACG GCTTCGAGAA CAACCCCCAC 
CTCGACGTGG TCAGGGCCAT CGCCGAGGAA GAAGGCGCCA TCGTGGTGCC GGTCTGCAAC 
AAGATCGAGG CGGAGATCGC CGAACTCGAC GACGACGAGG AAAAGCAGAT GTTCCTCGAG 
TCCATGGGCA TGGAAGAACC CGGCCTGAAC CGCGTGATCC GCGCCGGCTA CCAGCTCCTC 
AACCTGCAGA CCTACTTCAC CGCCGGGGTC AAGGAAGTGC GCGCCTGGAC CGTCAAGATC 
GGCGCCACCG CGCCGCAGGC CGCCGCGGTG ATCCACACCG ACTTCGAGAA GGGCTTCATC 
CGCGCCGAGG TCATCGCCTA CGACGACTTC ATCCAGTACA AGGGCGAAGC CGGCGCCAAG 
GAAGCAGGCA AATGGCGCCT GGAAGGCAAG GACTACATCG TCAAGGACGG CGACGTGATG 
CATTTCCGCT TCAACGTCTG A 

 

Protein sequence

MGFNCGIVGL PNVGKSTLFN ALTKSGIAAE NFPFCTIEPN SGIVPMPDPR LDALAAIVKP 
ERVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI AHVVRCFEDD NVIHVSNSVD 
PKRDIEIIDL ELIFADLDSC EKQLQKVVRS AKGGDKEALA QKSLLEKLIP HFSEGKPARS 
LMRGMDDEQK RIVRGFHLLT SKPVMYIANV AEDGFENNPH LDVVRAIAEE EGAIVVPVCN 
KIEAEIAELD DDEEKQMFLE SMGMEEPGLN RVIRAGYQLL NLQTYFTAGV KEVRAWTVKI 
GATAPQAAAV IHTDFEKGFI RAEVIAYDDF IQYKGEAGAK EAGKWRLEGK DYIVKDGDVM 
HFRFNV