| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41430 |
|---|
| Symbol | phr |
|---|
| ID | 7763025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4176789 |
|---|
| End bp | 4178195 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643806999 |
|---|
| Product | Deoxyribodipyrimidine photolyase |
|---|
| Protein accession | YP_002801250 |
|---|
| Protein GI | 226946177 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGT TGATCTGGCT GCGCAGCGAC CTGCGCGTCC GCGACAACCG CGCCCTGGGC
GCGGCCATGG GCGCCGGGCC GACCCTCGCC CTCTACCTGC TCAGCCCCGC TCAGTGGCGC
ACGCACGACG ACGCCCCATG CAAGGTCGAC TTCCGGCTGC GCAACCTCGC CGAGCTGTCG
CACGGCCTGG CAAGCCTGGG TGTGCCGCTG CTGATCCGCC GGGTCGATAC CTGGGACGAG
GCGCCCGCCC TCCTCACCCG CCTGTGCCAT GAGCAGAATA TCGTCCGGGT GCACGTCAAC
GACGAATACG GGGTCCACGA AAGCCGCCGC GACGCGGCGG TGGAGCGCGC ACTGCAGGCG
CAGGGCGTCG GCCTGCAGCG ACACCTGGAC CAGCTACTGC TCGCCCCGGA CAGCCTGCGG
ACCCGCTCCG GCGGCAGCTT CCGGCTGTTC GCTCAGTTCC GCCGGGCCTG CCACTGGCGC
CTGGCCGTCA GCCTGCCGGC AGTCGGCGGC CTGCCCATGG CACAGCCGCC GCTGAACGTC
GTCGGCAATG CCGTTCCCGC TGCGCTGGAA GGTTTCGCCA CGCCACCGGA ATCCCTGCGC
CGGCTCTGGC CGGCCGGCGA GATAGCCGCG CAGCGGCGCC TGCACGAATT CGTCGAGAAC
CGCCTCGCCG CCTACGCCGA AGCCCGCGAC TTTCCCGCCG AGCCCGGCAC CAGCCGGCTG
TCGCCCTACC TCGCCGCCGG CGTGCTGTCG CCGCGCCAGT GCCTGCATGC GGTGCTGCGC
ACCGGCGGAT TCGACCGTCC GGAGGCCTCC GCCTGGTTCG ACGAACTGCT CTGGCGCGAG
TTCTACAAAC ACATACTGGC AGGCCATCCG CGGGTTTCGA TGGGCCGTGC CTTGCGCACG
GAAACCGAGG CTCTGCCCTG GCGCGACGCT CCGCAAGAGC TGGCGGCCTG GCAGCAGGGG
CGTACCGGCT TTCCGCTGAT CGATGCGGCG ATGCGCCAGT TGCTCGCCAC CGGCTGGATG
CACAACCGCC TGCGCATGGT GGTCGCCATG TTCCTGAGCA AGAACCTGCT GATCGACTGG
CGGCACGGCG AGCGCTGGTT CATGCACCAC CTGATCGACG GCGACCTCGC CGCCAACAAC
GGCGGCTGGC AGTGGTGCGC CTCCACCGGC ACCGACGCGG TGCCCTACTT CCGTCTGTTC
AACCCGCTCG CCCAGTCGCG CCGGTTCGAC CCGGAGGGGC GCTTCATCCG CCAGTGGCTG
CCGGAACTGG CGAGTCTGGA CAACCGCGAC ATCCACGCAC CGGCCGGAGC GCTCCGCCCC
GCCGGCTACC CGCCGCCGAT CGTCGACCTG CCGTCCAGCC GGGAACGCGC CCTGGCCGCC
TTCAAGGCCC TGCGCCGCCG CGGCTGA
|
|---|
| Protein sequence | MRQLIWLRSD LRVRDNRALG AAMGAGPTLA LYLLSPAQWR THDDAPCKVD FRLRNLAELS
HGLASLGVPL LIRRVDTWDE APALLTRLCH EQNIVRVHVN DEYGVHESRR DAAVERALQA
QGVGLQRHLD QLLLAPDSLR TRSGGSFRLF AQFRRACHWR LAVSLPAVGG LPMAQPPLNV
VGNAVPAALE GFATPPESLR RLWPAGEIAA QRRLHEFVEN RLAAYAEARD FPAEPGTSRL
SPYLAAGVLS PRQCLHAVLR TGGFDRPEAS AWFDELLWRE FYKHILAGHP RVSMGRALRT
ETEALPWRDA PQELAAWQQG RTGFPLIDAA MRQLLATGWM HNRLRMVVAM FLSKNLLIDW
RHGERWFMHH LIDGDLAANN GGWQWCASTG TDAVPYFRLF NPLAQSRRFD PEGRFIRQWL
PELASLDNRD IHAPAGALRP AGYPPPIVDL PSSRERALAA FKALRRRG
|
|---|
| |