Gene Avin_41140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41140 
Symbol 
ID7762997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp4147738 
End bp4148406 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID643806971 
ProductOmpA family protein 
Protein accessionYP_002801222 
Protein GI226946149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGC TGGCCGGTTG TGCTTCGAAC GATAACCCTT ACCAGACCCA GGACCAGAAC 
CAGGCCGGGC AGAGCGGCAT GAGCCGCACC GCCAAGTACG GCGGTCTCGG TGCGCTGGCC 
GGCGCCGCCG CGGGCGCGCT GATCGATCAC GACAACCGTG GCAAGGGCGC CCTGATCGGC 
GCCGCGGTGG GCGGTGCCGC CGGCGCCGGC TACGGCTACT ACGCGGACAA GCAGGAAGCC 
CAGTTGCGCC AGCAGATGGC CGGCACCGGC GTCGAAGTGC AGCGCCAGGG CAACGACATC 
AAGCTGATCA TGCCCGGCAA CATCACCTTC GCCACCGGCT CGGCGGAAAT CGCCAGCAAC 
TTCTACACCC CGCTGAACGA TCTGGCGAAC TCCTTCAAGC AGTACGACCA GAACAGCATC 
GAGGTCATCG GCCACACCGA CAGCACCGGT TCCTACCAGA CCAACATGAG CCTGTCGCAG 
CGCCGTGCGC AGAGCGTGGC CAATTACCTG GTCGCCCAGG GCGTCAACGG CGCGCGGGTC 
ACCACCCGCG GCGCCGGTCC GGACTCGCCG GTGGCGAGCA ACGCCACCGA GTCCGGCCGT 
TCGCAGAACC GCCGCGTGGA GATCAACCTG CGCCCGCTGC CGGGCGCCGA AACCCAGCAG 
CAGCCGTAA
 
Protein sequence
MALLAGCASN DNPYQTQDQN QAGQSGMSRT AKYGGLGALA GAAAGALIDH DNRGKGALIG 
AAVGGAAGAG YGYYADKQEA QLRQQMAGTG VEVQRQGNDI KLIMPGNITF ATGSAEIASN 
FYTPLNDLAN SFKQYDQNSI EVIGHTDSTG SYQTNMSLSQ RRAQSVANYL VAQGVNGARV 
TTRGAGPDSP VASNATESGR SQNRRVEINL RPLPGAETQQ QP