Gene Avin_40980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_40980 
SymbolcobW 
ID7762983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4134242 
End bp4135213 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID643806957 
ProductCobalamin synthesis protein 
Protein accessionYP_002801208 
Protein GI226946135 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAC CCCCTATCCC GGTCACCGTG CTCAGCGGTT TTCTCGGCGC CGGCAAGACC 
ACCCTGCTGC AGTACCTGCT CAAGGCCGAG CACGGCCTGA AGATCGCGGT GATCGAGAAC
GAGTACAGCG AGACGCCGAT CGACGGCCAA CTGCTCGGCG CCGAGCCGGT CGAGGTGATG
ACCCTGGCCA ACGGCTGCGT GTGCTGCTCC ATTCATGTCG AGCTGGAAAA GGCGCTGTTC
CTCCTGCTGG AGCGCCTGGA CGCCGGCGAA CTCGATTTCG ACCGCCTGGT CATCGAATGC
ACCGGCCTGG CCGACCCGGC GCCGGTGGCG CAGACCTTCT TCGCCGACGA CGAGCTGTGC
GACCGCTATG TGCTCGACGG CATCATCACC CTGCTGGACG CCGCCAATGC CGGGCGTCAC
CTGCAGGAGG CCATCGCCCA GGCCCAGGTC GGCTTCGCCG ACCGCATCCT GCTGAGCAAG
ACCGATCTGG TGGCGGCCGA GGCGGTCGAG GCGCTGAGCC AGCGGCTGCA GCGCATCAAC
CGCCACGCGC CGATCCGCAT CGTCGAGCAC GGGCGCATCG AGCTGGGCGA ACTGCTCGAT
GTGCGCGGCT TCAACCTCAA CGCCGAGTTC GGCCAGGCCC TGGGCCTGCG CCCGCTCGTT
CCGGCCGCCG ATAAGGACCG TATCGCCACC CTGGTGCTGC GCAGCGAGCA GGCGCTGGAC
CTGGAGAAGC TCGGCCTGTT CATGGAGGGC CTGCTGGCGC GCTACGGCGA TTCGCTGCTG
CGCTACAAGG GCGTGCTGAA CCTGGCCGGC GAATCACGGC GCATGGTGTT CCAGGGTGTG
CTGCGCCTCT ACGGCTTCGA CTGGGCGGAG GAGTGGGGCG CCGACGAGAC GCGCGAAAGC
GTGCTGGTGT TCATCGGCGA TGATCTGCCG GAAGAGGATA TCCGTGCCGG ATTCGCCGAG
GTGCAGGGCT GA
 
Protein sequence
MSQPPIPVTV LSGFLGAGKT TLLQYLLKAE HGLKIAVIEN EYSETPIDGQ LLGAEPVEVM 
TLANGCVCCS IHVELEKALF LLLERLDAGE LDFDRLVIEC TGLADPAPVA QTFFADDELC
DRYVLDGIIT LLDAANAGRH LQEAIAQAQV GFADRILLSK TDLVAAEAVE ALSQRLQRIN
RHAPIRIVEH GRIELGELLD VRGFNLNAEF GQALGLRPLV PAADKDRIAT LVLRSEQALD
LEKLGLFMEG LLARYGDSLL RYKGVLNLAG ESRRMVFQGV LRLYGFDWAE EWGADETRES
VLVFIGDDLP EEDIRAGFAE VQG