Gene Avin_40830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_40830 
Symbol 
ID7762968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp4118827 
End bp4119321 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID643806942 
Producthypothetical protein 
Protein accessionYP_002801193 
Protein GI226946120 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTT TTCTCGAAAA TGCGATGTAT GCCTCCCGCT GGCTGCTGGC GCCGATCTAT 
ATCGGCCTGT CCGTGGCCCT GCTGGCGCTG ACCCTGAAGT TCTTCCAGGA GGTCTATCAT 
CTGCTGCCGC ACGTGCTCGA GATGGCCGAG GCGGAATTGA TCCTGGTCCT GCTTTCGATG 
ATCGACATGG CGCTGGTCGG CGGCCTGCTG GTGATGGTGA TGATTTCCGG CTACGAGAAC 
TTCGTCTCCC AACTGGACAT CGACGAGGGC AAGGAGAAGC TCGACTGGCT GGGCAAGATG 
GATTCCGGCT CGCTGAAGCT GAAGGTGGCC GCCTCCATCG TCGCCATCTC CTCGATCCAC 
CTGCTGCGTG TGTTCATGGA TGCGCAGAAG ATCCCCAACG ACAAGCTGCT GTGGTACGTG 
CTCATCCACA TGACCTTCGT CGTTTCCGCC TTCGTCATGA GCTATCTGGA GAAGATGGCC 
AAGCACGCCC ATTGA
 
Protein sequence
MERFLENAMY ASRWLLAPIY IGLSVALLAL TLKFFQEVYH LLPHVLEMAE AELILVLLSM 
IDMALVGGLL VMVMISGYEN FVSQLDIDEG KEKLDWLGKM DSGSLKLKVA ASIVAISSIH 
LLRVFMDAQK IPNDKLLWYV LIHMTFVVSA FVMSYLEKMA KHAH