Gene Avin_39740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39740 
Symbol 
ID7762863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4023982 
End bp4025829 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content71% 
IMG OID643806836 
ProductDNA helicase 
Protein accessionYP_002801088 
Protein GI226946015 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0820371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAC TCATCCCGGC GCCTGGCGCC TGTCTTTCGC GCATGACGGC CGGGGAGCGG 
CAGGTCGCCC GCGTGTTGCT GGACGGCCTC GAGGACGATT GCCTGATCTG GTACGACCTT
TTTCCCGGCG AAGGGCGCCA CTATCCCAAT TTCATCGTCC TGCACCCCGA GCGCGGTCTG
CTGTTTCTCG AGGTGCGGGA CTGGCGGGCG GGCAGCCTCA AGCGGATGTC CCGTGCCACC
TGTACGCTGG AGAGCGTCGA GGGCCGCCGC GAGGTGGCGC ATCCCCTGGA ACTGGGGCGG
CAAGGCATGC AGCGGCTGCT GAAGGAGCTG CTGCGCGATC CGCGACTGTG CCGGGACGGG
GAGGCGCGTC CGCCTTTTCC CTGCGGTTGG GGGCTGGTCC TCACCGGCAT CGCCCGTAGC
CAGTTGGAGC GGGGCATGCC CGCCGGGATG CGCGAGCAGT TGCTGCCGGA ACGGCAGGTA
CTCCATCGGG ACGAGTTGCA CGAACTGGAG CCCGGCGCCC TGCGCCGGCG CCTGGAGTCG
ATGTGCGTGC CCGGCGGCTC CGGCCGGCTG ACGCGGACGC AGATCGATGC CATCCGCTGG
CATCTGTTTC CCGAGCTGCG TATCGGCGAC GACGGTCTGC CACTGTCCGG GAGCGCTCCG
CCGCCGGCGG GCGGCATGCG GGTCATGGAC CTGCGTCAGG AGTACATCGC CCGCAGCCTC
GGCGAGGGGC AGCAGGTCGT CCGGGGGGGC GCCGGTTCCG GCAAGACGCT GATTCTCGGC
TACCGTTGCC TGCATCTGGC CGCGACGCTG CGCCGGCCGA TCCAGGTGCT GTGCTTCAAC
GCCGCCCTGG CGGCCAGGCT GCGCGGCTTC GTCGCCGCGC ACGGCATCGA CGAGCGGGTA
CGGGTCGAGC ATTTCCACGA CTGGTGCGAG CGGCAGCTCG AAACCTGGCA GGTCGAGTTG
CTGGAGGGCG AGGACGAGCA TTACTGGCGG GTCGCCGACT CGGTGATCGC CGGGGTGGAG
CGCGGGCGGA TTCCCGGCGG CCAGTACGGC GCGCTGCTGA TCGACGAAGG GCACGACTTC
GAGCCGGACT GGCTGCGCCT GCTCGCACGG ATGATCGACC CGGCCGAGGG TTCGCTGCTG
CTGCTCTACG ACGAGGCCCA AGCTCTCCAT CGGCGGCGTT CGGCGCAGGG CTTCGATCTG
GCCAGCGTGG GCTTCCGGGC GCCGGGCTTC CGGGAGCCGG GCGACCGGAC GCCGGGCAGC
GGCGGCATGC TCCGCCGCAA TTACCGCAAC AGCCGGGAAA TCCTCGCCTT CGGCCATTGC
CTGGCCGGTG GGCATCTGGC CGACGACGAG GGCGACATGC CGCCGGCAGC CGCCGCTCCG
GGGCCGCGGC CGGCGTTGCG GCGTTTCCCG CGCCTGTCCG GGGAGACGGC CCATGCCGTC
TGCTGCCTGC GCCAGTGGTA TGCCGAAGGG CTGGCCTGGG GCGACATGGC GCTGCTCTAT
CCGCAGGGCG GTGCCGGCGA GGCCATGGTC GAGGCGCTGG TCGCGCTCGG CATTCCCCAT
GCCTGGCTGG AAGACGACGA GGCCCGCCGC GGCTACCGCG CCGATGCGCA GCGGGTGTCG
GTCATGCCCA TCCAGGCCGC GAAGGGGCTG GAGTTCGCCG CGGTGGTGTT GTTCGACGCT
TCCTTCGTGG CGCCGGGCGA GGAGGCCGAC AGCTCGCTGC CCGAGCGGGT GCGGCTGCTG
CACATCGGCA TCGGCCGGGC GCGGCAGCGA CTGCTGGTCA GTTTCCATCG CAACAACGCG
CTCGCCCGGG CGCTGGGCGC GGACGAGCTG AGCCGCTACG CACATTGA
 
Protein sequence
MAELIPAPGA CLSRMTAGER QVARVLLDGL EDDCLIWYDL FPGEGRHYPN FIVLHPERGL 
LFLEVRDWRA GSLKRMSRAT CTLESVEGRR EVAHPLELGR QGMQRLLKEL LRDPRLCRDG
EARPPFPCGW GLVLTGIARS QLERGMPAGM REQLLPERQV LHRDELHELE PGALRRRLES
MCVPGGSGRL TRTQIDAIRW HLFPELRIGD DGLPLSGSAP PPAGGMRVMD LRQEYIARSL
GEGQQVVRGG AGSGKTLILG YRCLHLAATL RRPIQVLCFN AALAARLRGF VAAHGIDERV
RVEHFHDWCE RQLETWQVEL LEGEDEHYWR VADSVIAGVE RGRIPGGQYG ALLIDEGHDF
EPDWLRLLAR MIDPAEGSLL LLYDEAQALH RRRSAQGFDL ASVGFRAPGF REPGDRTPGS
GGMLRRNYRN SREILAFGHC LAGGHLADDE GDMPPAAAAP GPRPALRRFP RLSGETAHAV
CCLRQWYAEG LAWGDMALLY PQGGAGEAMV EALVALGIPH AWLEDDEARR GYRADAQRVS
VMPIQAAKGL EFAAVVLFDA SFVAPGEEAD SSLPERVRLL HIGIGRARQR LLVSFHRNNA
LARALGADEL SRYAH