Gene Avin_39610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39610 
SymbolpurT 
ID7762850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4008402 
End bp4009583 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID643806823 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_002801075 
Protein GI226946002 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTA TTGGAACTCC GCTGTCGCCG GGTGCGACCC GTGTATTGCT GTGTGGCTCA 
GGTGAACTGG GCAAAGAAGT GGTGATCGAG CTGCAGCGCT TCGGTGTGGA AGTGATCGCC
GTGGATCGCT ATGCCGACGC GCCGGCCATG CAGGTCGCCC ACCGCAGCCA CGTGATCAAC
ATGCTCGATG GCGCGGCCCT GCGCGCGCTG ATCGAGCAGG AACGGCCGCA CTACATCGTG
CCGGAAATCG AAGCCATCGC CACTGCGACT CTGGTCGAGC TGGAAAGCGA GGGCTTCACG
GTGATCCCCA GCGCGCGGGC CGCCAACCTG ACCATGAACC GCGAGGGTAT CCGCCGCCTG
GCGGCGGAGG AGCTGGGCCT GCCGACTTCG CCCTACCGCT TCGCCGACAG CTTCGAGGAG
TACCGCGCGG CGGCGGAAGC GCTCGGCTTT CCCTGCGTGG TCAAGCCGAT CATGAGTTCC
TCCGGCAAGG GACAGAGCCT GCTGAAGGGG CCCGAGCAAC TGCAGGCCGC CTGGGACTAC
GCCCAGGAAG GCGGGCGGGC CGGCAAGGGG AGGGTGATCG TCGAGGGCTT CATCGATTTC
GACTATGAAA TCACTCTGCT CACCGTGCGT CATGCGGGGG AGACCACCTT CTGCGCCCCC
ATCGGCCATC GCCAGGAGAA GGGCGACTAT CAGGAGTCCT GGCAGCCGCA GGCGATGAGC
ACGACGGCGC AGGCGGAATC CGAGCGCATC GCCAGGACCG TCACCGAAGC CTTGGGCGGG
CGCGGACTGT TCGGCGTAGA GCTGTTCGTC AAGGGCGACC AGGTCTGGTT CAGCGAGGTT
TCGCCGCGTC CCCACGATAC CGGTCTGGTG ACACTGATCT CCCAGGACCT TTCCGAGTTC
GCCCTGCATG CGCGAGCCAT TCTCGGCCTG CCGATCCCGG CGATCCGCCA GTTCGGCCCG
GCCGCTTCGG CGGTGATTCT GGTCGAGGGG CAGTCCCGCG AGGTGGGCTT CGCCAACCTG
GGACAGGCAC TCGCCGAACC GGATACCGCC TTGCGCCTGT TCGGCAAGCC GGAGGTCGCC
GGTCAGCGGC GGATGGGCGT GGCCCTGGCG CGGGATGTCT CGGTTGAAAC CGCACGGCAG
AAGGCGACGC GTGCCGCGCA GGCGGTCGAG GTGCAGTTGT AG
 
Protein sequence
MSRIGTPLSP GATRVLLCGS GELGKEVVIE LQRFGVEVIA VDRYADAPAM QVAHRSHVIN 
MLDGAALRAL IEQERPHYIV PEIEAIATAT LVELESEGFT VIPSARAANL TMNREGIRRL
AAEELGLPTS PYRFADSFEE YRAAAEALGF PCVVKPIMSS SGKGQSLLKG PEQLQAAWDY
AQEGGRAGKG RVIVEGFIDF DYEITLLTVR HAGETTFCAP IGHRQEKGDY QESWQPQAMS
TTAQAESERI ARTVTEALGG RGLFGVELFV KGDQVWFSEV SPRPHDTGLV TLISQDLSEF
ALHARAILGL PIPAIRQFGP AASAVILVEG QSREVGFANL GQALAEPDTA LRLFGKPEVA
GQRRMGVALA RDVSVETARQ KATRAAQAVE VQL