| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_39590 |
|---|
| Symbol | |
|---|
| ID | 7762848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4006196 |
|---|
| End bp | 4006996 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643806821 |
|---|
| Product | Cytochrome c assembly-like protein |
|---|
| Protein accession | YP_002801073 |
|---|
| Protein GI | 226946000 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.208055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCAC TGTTGCCCAG CCTCGCCGCC GCCGGTCTAT ACGCCTCCGC CACGCTCTAC
CAGGGCATGC GCCTGGCCAG GCACAGCCTG CCGGACAAAC GCCTGCTCCT GCTGCTGGGC
ATCCTGGCCC TGATCGCCCA CGGTATCAGC CTGGCGTTGC AACTGCTGGG GCCGAACGGC
CTGACCCTGC ACTTCTTCAA CGCCTCCAGC CTGATCGCCG CCGCAGTGAT CGCCCTGACC
CTGCTCGCCA GCTTCTACAT GCCGGTGGAG AACCTGTTGT TGCTGCTGCT GCCGCTGAGT
GCGCTCACCG TGCTGCTGGC GCAGTTCATG CCGGTCGGCA CCTTGAAGGG AGTCGACGAG
GAGCCAGGGA TCCTCGCCCA TATCCTGCTG TCGGTCCTCG CTTACGGCAT GCTCACCATC
GCCATGTTCC AGTCCCTGCT GCTGCTGCTG CAGGACTATC AACTCAAGCA CAAGCATCCT
TCAGGCCTGG CCCGCAACTT CCCACCCCTG CAGACCATGG AAAGCCTGCT GTTCGGTTTT
CTCTGGGCCG GCTGGGGACT GCTCTCGCTA TCGCTGCTCT CGGGCTGGCT GTTCCTCGAC
GATCTGTTCG CCCAGCACCT GGTGCACAAG ACCCTGCTCG CCTGTCTGGC CTGGCTGGTC
TTCTCCGCCC TGCTGATCGG CCGCCACCGC CTCGGCTGGC GCGGGCACAC GGCGATCCGC
TGGACCCTGA GCGGCTTCTG CCTGCTCATG CTCGCCTACT TCGGCAGCAA GCTGGTCCGC
GAATTCATCG TGCATGTTTA A
|
|---|
| Protein sequence | MHPLLPSLAA AGLYASATLY QGMRLARHSL PDKRLLLLLG ILALIAHGIS LALQLLGPNG
LTLHFFNASS LIAAAVIALT LLASFYMPVE NLLLLLLPLS ALTVLLAQFM PVGTLKGVDE
EPGILAHILL SVLAYGMLTI AMFQSLLLLL QDYQLKHKHP SGLARNFPPL QTMESLLFGF
LWAGWGLLSL SLLSGWLFLD DLFAQHLVHK TLLACLAWLV FSALLIGRHR LGWRGHTAIR
WTLSGFCLLM LAYFGSKLVR EFIVHV
|
|---|
| |