Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_39570 |
Symbol | ffh |
ID | 7762846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4004664 |
End bp | 4006040 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643806819 |
Product | signal recognition particle protein |
Protein accession | YP_002801071 |
Protein GI | 226945998 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.224172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAAA ACCTTACCGA TCGCCTTTCC CAGACCCTTC GTCATGTCAC CGGCAAGGCC AAGCTGACCG AGGACAACAT CAAGGATACC CTGCGCGAAG TGCGCATGGC CCTGCTCGAG GCCGATGTCG CGCTGCCGGT GGTCAAGGAG TTCGTCAATC GGATCAAGGA GCGCGCTGTC GGCACCGAGG TTTCGAAGAG CCTGACGCCG GGGCAGGCCT TCGTGAAGAT CGTCCGCGTC GAGCTGGAAA CGCTGATGGG GGCGGCCAAC GAGGATCTGG CGCTGAATGC GGCGCCGCCG GCGGTGGTAT TGATGGCTGG CCTGCAGGGG GCGGGCAAGA CCACCACCGT GGGCAAGCTC GCGCGCTTTC TCAAGGAGCG CCGCAAGAAG TCGGTCCTGG TGGTGTCCGC CGACATCTAC CGCCCGGCGG CGATCAAGCA GTTGGAAACC CTGGCCGAAG AGGTCGGCGT CACCTTCTTC CCATCCGATG CCGCTCAGAA GCCCGTGGAT ATAGCCCAGG CGGCGATTCG CGAGGCGCGG CTCAAATTCA TCGACGTGGT GCTGCTGGAT ACCGCCGGCC GTCTGCACGT CGATGCCGAC ATGATGGAGG AGATCAAGCT CCTGCATGCC GCCGCCAAGC CGGTCGAGAC CCTGTTCGTG GTCGATGCGA TGACGGGCCA GGACGCCGCC AACACGGCCA AGGCCTTCGG CGACGCCCTG CCGCTGACCG GCGTGGTGCT GACCAAGGTG GATGGCGACG CGCGTGGCGG TGCCGCCTTG TCGGTCCGCT ACATCACCGG CAAGCCGATC AAGTTCATCG GCATGGGCGA GAAGAGCGAT GCCCTGGAGC CCTTCCACCC GGATCGCATG GCTTCGCGCA TCCTCGGCAT GGGCGATGTG CTCAGCCTGA TCGAGGAGGC CGAGCACAAG CTCGACCGCC AGAAGGCGGA GAAGCTCACC AGCAAGCTGA AGAAGGGCAA GGGCTTCGAC CTTGAGGATT TCCGCGATCA GTTGCAGCAG ATGAAGAACA TGGGGGGGCT CGGCGGGCTG ATGGACAAGC TGCCGGCCAT CGGTGGCGTC AACCTGGCGC AGATGGGCAA TGCCCAGGGC GTGGCGGAAA AGCAGCTGAT GCAGATGGAG GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGATC CGGACATCAT CAGCGGTTCG CGCAAGCGGC GCATCGCCCT CGGTTCCGGC ACCCAGGTGC AGGATGTCGG CCGTTTGATC AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGTTCA CCGCCAAGGG GGGCATCACC AAGATGATGC GTGGCATGGG CGGCATGTTC CCCGGCGGTC GGCTGCCCAA GATCTAG
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Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKE FVNRIKERAV GTEVSKSLTP GQAFVKIVRV ELETLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTVGKL ARFLKERRKK SVLVVSADIY RPAAIKQLET LAEEVGVTFF PSDAAQKPVD IAQAAIREAR LKFIDVVLLD TAGRLHVDAD MMEEIKLLHA AAKPVETLFV VDAMTGQDAA NTAKAFGDAL PLTGVVLTKV DGDARGGAAL SVRYITGKPI KFIGMGEKSD ALEPFHPDRM ASRILGMGDV LSLIEEAEHK LDRQKAEKLT SKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPAIGGV NLAQMGNAQG VAEKQLMQME AIINSMTPAE RRDPDIISGS RKRRIALGSG TQVQDVGRLI KQHKQMQKMM KKFTAKGGIT KMMRGMGGMF PGGRLPKI
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