Gene Avin_39570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39570 
Symbolffh 
ID7762846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4004664 
End bp4006040 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content64% 
IMG OID643806819 
Productsignal recognition particle protein 
Protein accessionYP_002801071 
Protein GI226945998 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.224172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAA ACCTTACCGA TCGCCTTTCC CAGACCCTTC GTCATGTCAC CGGCAAGGCC 
AAGCTGACCG AGGACAACAT CAAGGATACC CTGCGCGAAG TGCGCATGGC CCTGCTCGAG
GCCGATGTCG CGCTGCCGGT GGTCAAGGAG TTCGTCAATC GGATCAAGGA GCGCGCTGTC
GGCACCGAGG TTTCGAAGAG CCTGACGCCG GGGCAGGCCT TCGTGAAGAT CGTCCGCGTC
GAGCTGGAAA CGCTGATGGG GGCGGCCAAC GAGGATCTGG CGCTGAATGC GGCGCCGCCG
GCGGTGGTAT TGATGGCTGG CCTGCAGGGG GCGGGCAAGA CCACCACCGT GGGCAAGCTC
GCGCGCTTTC TCAAGGAGCG CCGCAAGAAG TCGGTCCTGG TGGTGTCCGC CGACATCTAC
CGCCCGGCGG CGATCAAGCA GTTGGAAACC CTGGCCGAAG AGGTCGGCGT CACCTTCTTC
CCATCCGATG CCGCTCAGAA GCCCGTGGAT ATAGCCCAGG CGGCGATTCG CGAGGCGCGG
CTCAAATTCA TCGACGTGGT GCTGCTGGAT ACCGCCGGCC GTCTGCACGT CGATGCCGAC
ATGATGGAGG AGATCAAGCT CCTGCATGCC GCCGCCAAGC CGGTCGAGAC CCTGTTCGTG
GTCGATGCGA TGACGGGCCA GGACGCCGCC AACACGGCCA AGGCCTTCGG CGACGCCCTG
CCGCTGACCG GCGTGGTGCT GACCAAGGTG GATGGCGACG CGCGTGGCGG TGCCGCCTTG
TCGGTCCGCT ACATCACCGG CAAGCCGATC AAGTTCATCG GCATGGGCGA GAAGAGCGAT
GCCCTGGAGC CCTTCCACCC GGATCGCATG GCTTCGCGCA TCCTCGGCAT GGGCGATGTG
CTCAGCCTGA TCGAGGAGGC CGAGCACAAG CTCGACCGCC AGAAGGCGGA GAAGCTCACC
AGCAAGCTGA AGAAGGGCAA GGGCTTCGAC CTTGAGGATT TCCGCGATCA GTTGCAGCAG
ATGAAGAACA TGGGGGGGCT CGGCGGGCTG ATGGACAAGC TGCCGGCCAT CGGTGGCGTC
AACCTGGCGC AGATGGGCAA TGCCCAGGGC GTGGCGGAAA AGCAGCTGAT GCAGATGGAG
GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGATC CGGACATCAT CAGCGGTTCG
CGCAAGCGGC GCATCGCCCT CGGTTCCGGC ACCCAGGTGC AGGATGTCGG CCGTTTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGTTCA CCGCCAAGGG GGGCATCACC
AAGATGATGC GTGGCATGGG CGGCATGTTC CCCGGCGGTC GGCTGCCCAA GATCTAG
 
Protein sequence
MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKE FVNRIKERAV 
GTEVSKSLTP GQAFVKIVRV ELETLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTVGKL
ARFLKERRKK SVLVVSADIY RPAAIKQLET LAEEVGVTFF PSDAAQKPVD IAQAAIREAR
LKFIDVVLLD TAGRLHVDAD MMEEIKLLHA AAKPVETLFV VDAMTGQDAA NTAKAFGDAL
PLTGVVLTKV DGDARGGAAL SVRYITGKPI KFIGMGEKSD ALEPFHPDRM ASRILGMGDV
LSLIEEAEHK LDRQKAEKLT SKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPAIGGV
NLAQMGNAQG VAEKQLMQME AIINSMTPAE RRDPDIISGS RKRRIALGSG TQVQDVGRLI
KQHKQMQKMM KKFTAKGGIT KMMRGMGGMF PGGRLPKI