| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_39530 |
|---|
| Symbol | rplS |
|---|
| ID | 7762842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4002580 |
|---|
| End bp | 4002930 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643806815 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_002801067 |
|---|
| Protein GI | 226945994 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0334012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA AGATCATTCA GCAGCTCGAA GCCGAGCAGA TGAGCAAAGA GATTCCGGCT
TTCGCCCCGG GCGACACCGT GATCGTGCAG GTTAAGGTGA AGGAGGGCGA GCGCCAGCGT
CTGCAGGCTT TCGAGGGTGT GGTCATCGGC AAGCGCAACC GCGGCCTGAA CAGCGCTTTC
ACCGTGCGCA AGATCTCCAG CGGCGTGGGC GTCGAGCGTA CTTTCCAGAC CTACAGCCCG
CTGGTCGACA GCATTACCGT CAAGCGTCGC GGTGACGTGC GCAAGGCCAA GCTGTATTAT
CTCCGCGACC TGTCCGGCAA AGCGGCACGT ATCAAGGAAA AGCTTTCCTG A
|
|---|
| Protein sequence | MTNKIIQQLE AEQMSKEIPA FAPGDTVIVQ VKVKEGERQR LQAFEGVVIG KRNRGLNSAF
TVRKISSGVG VERTFQTYSP LVDSITVKRR GDVRKAKLYY LRDLSGKAAR IKEKLS
|
|---|
| |