Gene Avin_39480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39480 
SymbolthrC 
ID7762837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3997300 
End bp3998709 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content68% 
IMG OID643806810 
Productthreonine synthase 
Protein accessionYP_002801062 
Protein GI226945989 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTACA TCAGCACCCG TGGCCAGGCG CCGGCCCTGA ATTTCGAAGA CGTGCTGCTG 
GCCGGCCTGG CCAGCGACGG CGGCCTCTAC GTGCCGGAAA GCCTGCCGCG CTTCACCCTC
GAGGAGATCG CCTCCTGGGC CGGCCTGCCG TACCACGAGC TGGCCTTCCG GGTGATGCGC
CCGTTCGTCG CCGGCTGCAT CGCCGACGCC GACTTCAGGC GGATTCTGGA AGAGACCTAC
GGCGTATTCG CCCACAAGGC GGTGGCGCCG CTGACCCAAC TGGGCGCCAA CGAGTGGGTG
CTCGAACTCT TCCAGGGCCC GACCCTGGCG TTCAAGGACT TCGCCCTGCA ACTGCTCGGC
CGTCTGCTCG ACCATGTGCT GACCAGGCGC GGCGAGCGCG TGGTGATCAT GGGCGCCACC
TCGGGCGACA CCGGCTCGGC CGCCATCGAG GGCTGCAAGG CCTGCGACAA CGTCGACATC
TTCATCATGC ACCCGCACAA CCGCGTGTCC GAGGTGCAGC GCCGGCAGAT GACCACCATC
CTCGGCGACA ACATCCACAA CATCGCCATC GAGGGCAACT TCGACGACTG CCAAGAGATG
GTCAAGGCCA GCTTCGCCGA CCAGGGCTTC CTCAAGGGCA CCCGGCTGGT GGCGGTCAAC
TCGATCAACT GGGCGCGGAT CATGGCCCAG ATCGTCTACT ACTTCCATGC CGCCCTGCAG
CTCGGCGCGC CGCATCGCTC GCTGGCCTTC TCGGTGCCGA CCGGCAACTT CGGCGATATC
TTCGCCGGCT ACCTGGCGCG CAACATGGGC CTGCCGGTCA ACCAACTGAT CGTCGCCACC
AACCGCAACG ACATCCTGCA CCGCTTCATG TCCGGCAACC GTTACGACAA GGACACCCTG
CACCCGTCGC TGTCGCCGTC CATGGACATC ATGGTGTCGT CCAACTTCGA GCGCCTGCTG
TTCGACCTGC ACGGCCGCAA CGGCGCCGTC GTCGCCGCGC TGATGGACGC CTTCAAGGCC
ACCGGCAGGC TGTCGGTCGA GGACGACCGC TGGACCGAGG CGCGTCGTCT GTTCGACTCG
CTGGCGGTGG ACGACGAAAC CACCTGCGCG ACCATCGCCG GGGTGCACGG CGAAACCGGC
TACCTGCTCG ACCCGCATAC CGCGATCGGC GTCAGGGCCG CCCGCGAATG CCGGCGCAAC
CCGGCCCTGC CGATGGTCAT TCTGGGCACC GCGCATCCGG TCAAGTTCCC CGAGGCGGCG
GAGAAGGCCG GCATCGCCGC CGTTCCGCAA CTGCCGGCGC ACCTGGCCGA CCTGTTCCAG
CGCGAGGAGC GCTGCTCCGT GCTGCCCAAC GACCTGAAGG CGGTGCAGGC CTTCGTCAGC
CTGCACGGCA ATCGCGGCAA GCCGCTGTAA
 
Protein sequence
MRYISTRGQA PALNFEDVLL AGLASDGGLY VPESLPRFTL EEIASWAGLP YHELAFRVMR 
PFVAGCIADA DFRRILEETY GVFAHKAVAP LTQLGANEWV LELFQGPTLA FKDFALQLLG
RLLDHVLTRR GERVVIMGAT SGDTGSAAIE GCKACDNVDI FIMHPHNRVS EVQRRQMTTI
LGDNIHNIAI EGNFDDCQEM VKASFADQGF LKGTRLVAVN SINWARIMAQ IVYYFHAALQ
LGAPHRSLAF SVPTGNFGDI FAGYLARNMG LPVNQLIVAT NRNDILHRFM SGNRYDKDTL
HPSLSPSMDI MVSSNFERLL FDLHGRNGAV VAALMDAFKA TGRLSVEDDR WTEARRLFDS
LAVDDETTCA TIAGVHGETG YLLDPHTAIG VRAARECRRN PALPMVILGT AHPVKFPEAA
EKAGIAAVPQ LPAHLADLFQ REERCSVLPN DLKAVQAFVS LHGNRGKPL