Gene Avin_39460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39460 
Symbol 
ID7762835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3995350 
End bp3996597 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content69% 
IMG OID643806808 
Productguanylyl cyclase 
Protein accessionYP_002801060 
Protein GI226945987 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCGC GCCCGAACGG TTCGGGCATG GCGTCCGAGG GCTGGCGCCA TGCCATCGGC 
GCACGTAAAG TTTCGCCTCC CGGTCCCGGC CCCAGCCTGT CCATGACCCT GCATCTGCCC
ACCCTGCTGC TGACGGTTGT CTACGTCCTG ATCCTGCTGG GCCTGCTGAT GCTGCATGCC
TGGTGGCGCA GCGAAGGCGA GTCGACCCTC GGCTACATGG CCGGCACGCT GCTGGTAGCC
GCTGCCGGCA TGCTGCTGGG CAGCCTGCGC GGCATCGGCA TCGATACCCT GTCCATCGTG
CTCGGCAACA TGCTGCTGCA ATTGTCGGGC GGACTGGGTT GGACGACTTC GCGGGTGTTC
GCCGGGCGAC CGGCCTGGTG GCCGGGAATC ATGGGCGGCG CGCTGCTCTG GGGGCTGCTC
TGCCTGTGGC CGACATTCCT GGCCTCGCTG CCGCTGCGGG TGGCGATCGC CAACCTGCTG
GTGATTCTCT ACAGCGCGCT GGGGGCCTGG GAGCTCTGGC GTGTCCGCGC CTCCCTGACG
GTCTCCGTCG CGCCGGCGCT GGGGATGCTG GTCCTGCACG GCACTTTCTA CTGCCTGCGG
CTGTCGTTCG ATCGCGGCGC CTCCATCGGC CTGCGCTGGA GCGAAAGCGG TGCCGACTTC
ATGGCCTGGA TGGTGCTGGA GGCCTTCCTG TTCGCCAACG GCATCGCCTT CGCTACCCTG
GCCATGGTCC GCGAGCGCGC CGAGCAGCGC TACCGGGCGG TGGCCTATCG CGATCCGCTC
ACCGACATCG GCAACCGCCG GGCCTTCACC AGCGGCGGCG AGGTTCTGTT GGCCCGCTGC
GCCGCCGAGG GACGGCCGGC GGCCTTGCTG CTCTGCGACC TCGATCATTT CAAGCGACTG
AACGATACCC ATGGGCACGC CATGGGCGAT GCGGCGCTGG TCGCCTTCGG CCGTCTGCTC
GCCTTGGGGG TCCGCCAGCA GGATATTTGC GGGCGCATCG GCGGCGAGGA GTTCGCCTGT
CTGCTGCCCG GGGCGGACAG GACGGTATCG CTGCAGGTGG CCGAGCGCAT CCGCCAGGCC
TGCAGCGAAC TGTCGCTGGA GCCGGGGGTG CGCGTCAGCG TCAGCATCGG CGTCGCCTCC
AGCGAACAGG CCGGCTACGA CCTGTCGCGC CTGCTGGCGC TGAGCGATCA GGCACTGTAC
CGGGCCAAGG CCAACGGTCG CGATCGGGTC GAGTGTTCCG CCGACTGA
 
Protein sequence
MAPRPNGSGM ASEGWRHAIG ARKVSPPGPG PSLSMTLHLP TLLLTVVYVL ILLGLLMLHA 
WWRSEGESTL GYMAGTLLVA AAGMLLGSLR GIGIDTLSIV LGNMLLQLSG GLGWTTSRVF
AGRPAWWPGI MGGALLWGLL CLWPTFLASL PLRVAIANLL VILYSALGAW ELWRVRASLT
VSVAPALGML VLHGTFYCLR LSFDRGASIG LRWSESGADF MAWMVLEAFL FANGIAFATL
AMVRERAEQR YRAVAYRDPL TDIGNRRAFT SGGEVLLARC AAEGRPAALL LCDLDHFKRL
NDTHGHAMGD AALVAFGRLL ALGVRQQDIC GRIGGEEFAC LLPGADRTVS LQVAERIRQA
CSELSLEPGV RVSVSIGVAS SEQAGYDLSR LLALSDQALY RAKANGRDRV ECSAD