| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_39020 |
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| Symbol | dapC |
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| ID | 7762791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3950157 |
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| End bp | 3951353 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643806765 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_002801017 |
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| Protein GI | 226945944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0524021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG CCCTGAACCT GCTGCAACCC TATCCCTTCG AGAAGCTCCG CGCGCTGCTC
GCCGGCGTGC AGCCGCCGGC CGGCAAGAAG CCCATCGCCC TGTCCATCGG CGAACCCAAG
CACCGCTCGC CGAGCTTCGT CGTCGAGGCC CTGGCCGCCA ACCTCGAACA GCTCGCGGTC
TACCCCACCA CCCTCGGCCT GCCGGCGCTG CGCGAAGCCA TCGCCCGCTG GTGCGAGCGG
CGTTTCCGGG TGCCGGCCGA CCGGCTGGAC CCGGCGCGCC ACGTGCTGCC GGTCAACGGC
ACCCGCGAGG CGCTGTTCGC CTTCGCCCAG ACCGTGGTGA AGCGCACGGG CAACGGCCTG
GTGGTCAGCC CCAACCCCTT CTACCAGATC TACGAAGGCG CGGCCCTGCT CGCCGGGGCC
ACCCCGCACT ACCTGCCGTG CCTTCCGGAG AACGGTTTCA ATCCCGACTT CGACGCGGTA
CCGGCGGACG TCTGGCGGCG CTGCCAGTTG CTGTTCCTCT GCTCGCCGGG CAACCCCACC
GGCGCCCTGG TGCCGCTCGC CACCCTGAAG AAGCTGATCG CCCTGGCCGA CGAGCACGAC
TTCGTGATCG CCGCCGACGA GTGCTACAGC GAGCTGTACT TCGACGAACA GAACCCGCCG
CCCGGCCTGC TCACCGCCTG CGCCGAGCTG GGCCGCGACG ACTTCCGCCG CTGCGTGGTG
TTCCACAGCC TGTCCAAGCG CTCCAACCTG CCGGGCCTGC GCTCGGGCTT CGTCGCCGGC
GATGCCGAGA TCCTCAAGAG CTTCCTGCTC TACCGCACCT ACCACGGCTG CGCCATGCCG
GTGCCGACCC AACTGGCCAG CATCGCCGCC TGGAGCGACG AGGTCCATGT GCGCGCCAAC
CGTGTGCTGT ACCGGGAGAA GTTCGACGCC GTGCTGGGCA TCCTGCAGCC GGTGCTCGAC
GTCGAGCGCC CGGACGGCAG TTTCTACCTG TGGCCGCGCA CTCCGGTGGA CGACCAGGTC
TTCACCCGCG ACCTGTTCGC CCGCGAGCAC GTGACCGTGG TGCCGGGCGC CTACCTGTCG
CGCAGCGTGG ACGGCCTCAA CCCCGGCGCC GACCGCGTGC GCATGGCCCT GGTCGCCCCG
CTGAACGAAT GCGTGGAAGC CGCCGGGCGC ATCCGCGACT TCGTTCGCGC GGGCTGA
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| Protein sequence | MNDALNLLQP YPFEKLRALL AGVQPPAGKK PIALSIGEPK HRSPSFVVEA LAANLEQLAV
YPTTLGLPAL REAIARWCER RFRVPADRLD PARHVLPVNG TREALFAFAQ TVVKRTGNGL
VVSPNPFYQI YEGAALLAGA TPHYLPCLPE NGFNPDFDAV PADVWRRCQL LFLCSPGNPT
GALVPLATLK KLIALADEHD FVIAADECYS ELYFDEQNPP PGLLTACAEL GRDDFRRCVV
FHSLSKRSNL PGLRSGFVAG DAEILKSFLL YRTYHGCAMP VPTQLASIAA WSDEVHVRAN
RVLYREKFDA VLGILQPVLD VERPDGSFYL WPRTPVDDQV FTRDLFAREH VTVVPGAYLS
RSVDGLNPGA DRVRMALVAP LNECVEAAGR IRDFVRAG
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