Gene Avin_38980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38980 
Symboltsf 
ID7762787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3944581 
End bp3945450 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID643806761 
Productelongation factor Ts 
Protein accessionYP_002801013 
Protein GI226945940 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA TTACCGCGGC GCTGGTCAAG GAGCTACGCG AGCGTACCGG CCAGGGCATG 
ATGGAGTGCA AGAAGGCCCT GGTCGCCGCC GGCGGCGACA TCGAGAAGGC CATCGACGAC
ATGCGTGCCT CCGGCGCAAT CAAGGCCGCC AAGAAGGCCG GCAACATCGC CGCCGAAGGC
TCCATCGCGG TCAAGGTGTC CGACGACAAC AAGGCGGCCG TGATCATCGA GGTCAACGCC
CAGACCGACT TCCTGGCCCT GCAGGAAGAT TTCAAGGCCT TCGTCGCCGA AAGCCTCGAG
AAGGCCTTCG CCGACAAGCT GACCGACGCC GCTCCGCTGA TCGCGGACCG GGAGTCGGCC
CGCGAGGCGC TGGTGGCCAA GTGCGGCGAG AACGTCAACA TCCGTCGTCT GACCCGTGTC
GAGGGCGACG TGGTGGGTGC CTACCTGCAT GGTCACCGCA TCGGCGTGCT GGTCAACCTG
AAGGGCGGCA ACCCCGAGCT GGCCAAGGAA ATCGCCATGC ACGTGGCGGC CAGCAACCCG
CAGTTCCTGA GCCCGTCCCA GGTGTCCGAG GAGGCGGTCG CCAAGGAAAA GGAAATCTTC
CTGGCGCTGA ACGCCGACAA GATCGCCGGC AAGCCGGAGA ACATCGTCGA GAACATGGTC
AAGGGCCGCA TCAACAAGTT CCTCGCCGAA GCCAGCCTGG TCGAGCAGCC GTTCGTCAAG
GACCCGGAAA TCAAGGTGGG CGAACTGGCC AAGAAGGCCG GAGCCGAAAT CGTCTCCTTC
GTCCGCTACG AGGTGGGCGA GGGCATCGAG AAGGCCGAGG TCGACTTCGC CGCTGAAGTG
GCTGCCCAGC TCGCCGCCAG CAAGCAATAA
 
Protein sequence
MAEITAALVK ELRERTGQGM MECKKALVAA GGDIEKAIDD MRASGAIKAA KKAGNIAAEG 
SIAVKVSDDN KAAVIIEVNA QTDFLALQED FKAFVAESLE KAFADKLTDA APLIADRESA
REALVAKCGE NVNIRRLTRV EGDVVGAYLH GHRIGVLVNL KGGNPELAKE IAMHVAASNP
QFLSPSQVSE EAVAKEKEIF LALNADKIAG KPENIVENMV KGRINKFLAE ASLVEQPFVK
DPEIKVGELA KKAGAEIVSF VRYEVGEGIE KAEVDFAAEV AAQLAASKQ