| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_38190 |
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| Symbol | pcaB |
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| ID | 7762710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3864073 |
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| End bp | 3865425 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643806684 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_002800936 |
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| Protein GI | 226945863 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.569484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACC AACTCTTCGA TGCCTACTTC ACCAGCGCGC CGATGCGCGC GGTGTTTTCC
GACCGCGGGC GGCTGCAGGG CATGCTCGAT TTCGAGGCCG CGCTGGCGCG AGCCGAAGCG
GCGGTCGGGC TGATTCCCGA GGCCGCCGTG GCGCCGATCG CCGAGGCCTG CGTGGCCGAG
CGCTTCGATG TCGCCGCCCT GGCTCTGGCC ATCGCCACCG CCGGCAATTC GGCGATTCCG
CTGGTCAAGG CGCTCGGCCG ACGGATCGCC GCCGTGGATG CCGACGCCGA ACGTTACCTG
CACCTCGGCG CCACCAGCCA GGACGCCATG GACAGCGGCC TGGTGCTGCA ACTGCGCGCC
GCCGTCGCGC TGTTCGAAAG CGAGCTGGCG CAACTGGCCG AAGACCTCGC CGTGCAGGCC
GAGCGCCACG CCGACACGGC GCTGGCCGGA CGCACCTGGC TGCAGCACGC CACCCCGGTG
ACCCTCGGCA TGAAGCTCGC CGGCCTGCTC GGCGCCGTCA CCCGCCAGCG CCGGCGGCTG
GCCGAGCTGA AGCCGCGCCT TCTGGTCCTG CAGTTCGGCG GTGCCGCCGG CACCCTGGCG
GCGCTGGGCG AGCAGGCCCT GCCGGTTTCC GAGGCGCTGG CCCGCGAACT CGACCTGGGC
CTGCCCGAGC AGCCCTGGCA TACCCAGCGC GACCGCCTGG CCGAGTTCGC CGGCTGGCTG
GGGCTCTTGG CCGGTACTCT CGGCAAGCTC GGCCGCGACC TGTCGCTGCT GATGCAGACC
GACGTCGGCG AAGTGTTCGA GCCCTCGGCG CCGGGCAAGG GCGGCTCCTC GACCATGCCG
CACAAGCGCA ACCCGGTCGG CGCCGCCGTA CTGATCGGCG CCGCCACCCG CGCGCCGGGG
CTGGTCGCCA CCATGCTCGC CGCCATGCCC CAGGAACACG AGCGCAGCCT CGGCCTCTGG
CATGCCGAGT GGGAAACCCT GCCCGAGCTG TGCTGTCTGC TTTCCGGCGC CCTGCAGCAG
GCGCGCCTGC TGTTGCCGGG ACTGGAGGTG GATGCCGCGC GCATGCGCGA GAACCTCGAC
CTGACCCGGG GGCTGGTGCT CGCCGAGGCG GTGAGCATCG CCCTGGCCCG GAAGCTGGGC
CGCGAGCGTG CTCATCATCT GGTCGAGCAG TGTTGCCGCC AGGCCATCGC CGAGGGACGC
CACCTGCGCG CCGCGCTCGG CGCCGATCCC GAGGTGAGCG CCGAGCTGTC CGCCGCCGAA
CTGGAGCGCC TGCTCGATCC GTCCCATTAC CTAGGCCTGG CGCAGCGCTG GGTCGCCCGT
GCGGTGGCCG AACACCGCGC CACCCACTGT TAG
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| Protein sequence | MSNQLFDAYF TSAPMRAVFS DRGRLQGMLD FEAALARAEA AVGLIPEAAV APIAEACVAE
RFDVAALALA IATAGNSAIP LVKALGRRIA AVDADAERYL HLGATSQDAM DSGLVLQLRA
AVALFESELA QLAEDLAVQA ERHADTALAG RTWLQHATPV TLGMKLAGLL GAVTRQRRRL
AELKPRLLVL QFGGAAGTLA ALGEQALPVS EALARELDLG LPEQPWHTQR DRLAEFAGWL
GLLAGTLGKL GRDLSLLMQT DVGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRAPG
LVATMLAAMP QEHERSLGLW HAEWETLPEL CCLLSGALQQ ARLLLPGLEV DAARMRENLD
LTRGLVLAEA VSIALARKLG RERAHHLVEQ CCRQAIAEGR HLRAALGADP EVSAELSAAE
LERLLDPSHY LGLAQRWVAR AVAEHRATHC
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