Gene Avin_38140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38140 
Symbol 
ID7762705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3858708 
End bp3859970 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content63% 
IMG OID643806679 
Productouter membrane porin, OprD family 
Protein accessionYP_002800931 
Protein GI226945858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.35855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCG TTCGGCGCGC GAAGCCTTGC CGAATCGCAC TCCCCTTCGC GCTGGCCACC 
GCCCTGCCGT CCGGCGCGCT GCATGCCGCC TTCTTCGAAG ATGCCAAGGG CACGCTGAAC
CTGCGCAACT ACTATCTGAA TCGGGATTAC GATCACGGGG CCACTCGCGG CAAGGCCGAG
GAGTGGACCC AGAGCTTTAT CCTGAACGTG CAATCGGGCT TCACCGAAGG CCCGGTCGGT
TTCGGCATCG ACCTGCTCGG GCTCTGGTCG GTCAAGCTCG ACGGCGGCAG GGGTACCTAC
GGCACCCAGT TGCTGCCCAC GCACGATGGC AACAAGCCGG CTGACGACTT CGGCCGCTTC
GGCGTCGCCT TCAAGGCACG TTATTCCAAT ACCGAGATCA AGATCGGCGA GTGGAATCCG
GTGCTGCCCA TCCTGAGTTC GGACGACGGA CGCGGCCTGA CCCAGACCTT CCAGGGCGGC
ATGCTCACCT CCAGGGAAAT CAAGAATGTG ACCATCCATG CAGGACAGAT GCGCCAGACC
AGCCCGCGCA ACGATGCCAG CATGCAGGAC ATGACCCTCG ACGGCATCAG CAGCCGCGAC
AGCTCCGACC GCTTCAACTT CGGCGGCATC GAATACAGCT TCAACGACGG CAGGACCATG
CTCAGCGCCT GGTTCGCACA ACTGGAGGAC CTCTACAAGC AGCGCTACTT CGAGATCCGC
CATACCCAGC CGCTGGGCGG CGACGCATCG TTCAACGCCA AGCTGGGGCT CTTCGACGGC
GAGGAGGACG GCCAGGCCTT CGCCGGCGAC CTGGACAACA AGACCTTCTT CGGCCGCTTC
GCCCTCAGGA CCGGCAGCAA CACCTTCACC TTCGCCTACC AGAAACTCAC CGGCAAGGAC
CGCTGGCTGC AGGTCAACGG CACCAGCGCC GATCCCCTGC CCAACGATGT CTACGCCGGC
CCCTACAACA ATCCCAAGGA AGAATCCTGG CAGATCCGCC ACGACTATAA CTTCGCCGGC
CTCGGCATTC CCGGCATGAC CTTCATGAGC CGCTACATCG ACGGCCGGAA CGTGCACAGG
GACGGCGCGA CCAACGGCGA AACCTGGAGC CGCGAGAACG AACTGGCCTA CGTCTTCCAG
AGCGGCTCGC TGAAGAACCT CACCGTCCGC CTGCGTAACT CGACCAAACG TGCCAACTGG
GGCACCAACA CCAGTTGGAA CGAGAATCGC GTGGTCATCA ATTACCCGAT CTCGCTGTTC
TGA
 
Protein sequence
MSTVRRAKPC RIALPFALAT ALPSGALHAA FFEDAKGTLN LRNYYLNRDY DHGATRGKAE 
EWTQSFILNV QSGFTEGPVG FGIDLLGLWS VKLDGGRGTY GTQLLPTHDG NKPADDFGRF
GVAFKARYSN TEIKIGEWNP VLPILSSDDG RGLTQTFQGG MLTSREIKNV TIHAGQMRQT
SPRNDASMQD MTLDGISSRD SSDRFNFGGI EYSFNDGRTM LSAWFAQLED LYKQRYFEIR
HTQPLGGDAS FNAKLGLFDG EEDGQAFAGD LDNKTFFGRF ALRTGSNTFT FAYQKLTGKD
RWLQVNGTSA DPLPNDVYAG PYNNPKEESW QIRHDYNFAG LGIPGMTFMS RYIDGRNVHR
DGATNGETWS RENELAYVFQ SGSLKNLTVR LRNSTKRANW GTNTSWNENR VVINYPISLF