Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38140 |
Symbol | |
ID | 7762705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3858708 |
End bp | 3859970 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643806679 |
Product | outer membrane porin, OprD family |
Protein accession | YP_002800931 |
Protein GI | 226945858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.35855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCG TTCGGCGCGC GAAGCCTTGC CGAATCGCAC TCCCCTTCGC GCTGGCCACC GCCCTGCCGT CCGGCGCGCT GCATGCCGCC TTCTTCGAAG ATGCCAAGGG CACGCTGAAC CTGCGCAACT ACTATCTGAA TCGGGATTAC GATCACGGGG CCACTCGCGG CAAGGCCGAG GAGTGGACCC AGAGCTTTAT CCTGAACGTG CAATCGGGCT TCACCGAAGG CCCGGTCGGT TTCGGCATCG ACCTGCTCGG GCTCTGGTCG GTCAAGCTCG ACGGCGGCAG GGGTACCTAC GGCACCCAGT TGCTGCCCAC GCACGATGGC AACAAGCCGG CTGACGACTT CGGCCGCTTC GGCGTCGCCT TCAAGGCACG TTATTCCAAT ACCGAGATCA AGATCGGCGA GTGGAATCCG GTGCTGCCCA TCCTGAGTTC GGACGACGGA CGCGGCCTGA CCCAGACCTT CCAGGGCGGC ATGCTCACCT CCAGGGAAAT CAAGAATGTG ACCATCCATG CAGGACAGAT GCGCCAGACC AGCCCGCGCA ACGATGCCAG CATGCAGGAC ATGACCCTCG ACGGCATCAG CAGCCGCGAC AGCTCCGACC GCTTCAACTT CGGCGGCATC GAATACAGCT TCAACGACGG CAGGACCATG CTCAGCGCCT GGTTCGCACA ACTGGAGGAC CTCTACAAGC AGCGCTACTT CGAGATCCGC CATACCCAGC CGCTGGGCGG CGACGCATCG TTCAACGCCA AGCTGGGGCT CTTCGACGGC GAGGAGGACG GCCAGGCCTT CGCCGGCGAC CTGGACAACA AGACCTTCTT CGGCCGCTTC GCCCTCAGGA CCGGCAGCAA CACCTTCACC TTCGCCTACC AGAAACTCAC CGGCAAGGAC CGCTGGCTGC AGGTCAACGG CACCAGCGCC GATCCCCTGC CCAACGATGT CTACGCCGGC CCCTACAACA ATCCCAAGGA AGAATCCTGG CAGATCCGCC ACGACTATAA CTTCGCCGGC CTCGGCATTC CCGGCATGAC CTTCATGAGC CGCTACATCG ACGGCCGGAA CGTGCACAGG GACGGCGCGA CCAACGGCGA AACCTGGAGC CGCGAGAACG AACTGGCCTA CGTCTTCCAG AGCGGCTCGC TGAAGAACCT CACCGTCCGC CTGCGTAACT CGACCAAACG TGCCAACTGG GGCACCAACA CCAGTTGGAA CGAGAATCGC GTGGTCATCA ATTACCCGAT CTCGCTGTTC TGA
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Protein sequence | MSTVRRAKPC RIALPFALAT ALPSGALHAA FFEDAKGTLN LRNYYLNRDY DHGATRGKAE EWTQSFILNV QSGFTEGPVG FGIDLLGLWS VKLDGGRGTY GTQLLPTHDG NKPADDFGRF GVAFKARYSN TEIKIGEWNP VLPILSSDDG RGLTQTFQGG MLTSREIKNV TIHAGQMRQT SPRNDASMQD MTLDGISSRD SSDRFNFGGI EYSFNDGRTM LSAWFAQLED LYKQRYFEIR HTQPLGGDAS FNAKLGLFDG EEDGQAFAGD LDNKTFFGRF ALRTGSNTFT FAYQKLTGKD RWLQVNGTSA DPLPNDVYAG PYNNPKEESW QIRHDYNFAG LGIPGMTFMS RYIDGRNVHR DGATNGETWS RENELAYVFQ SGSLKNLTVR LRNSTKRANW GTNTSWNENR VVINYPISLF
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