Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_37650 |
Symbol | rimO |
ID | 7762657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3810537 |
End bp | 3811859 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643806631 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_002800884 |
Protein GI | 226945811 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG AAGTTCCTAG CATAGGTTGG GTGTCGCTCG GGTGCCCGAA GGCCACCGTC GACTCCGAAC GCATCCTCAC CCAGTTGCGC ACGGAGGGTT ACCGGATCGT ACCGTCCTAC GAGGAGGCCG ACGTGGTGGT GGTCAACACC TGCGGCTTCA TCGACAGCGC CAAGGCCGAG TCCCTCGATG CCATCGGCGA GGCCCTGGCG GAAAATGGCA AGGTGATCGT CACCGGCTGC ATGGGCGTAT CCGAGGAAGC CATCCGCAAC GTGCATCCCA GCGTGCTGGC GGTCACCGGC CCGCAGCAGT ACGAGCAGGT GGTCAGCGCC GTGCACGAGG TGGCGCCGCC GAAGGCCGAC CACGATCCCT TCGTCGATCT GGTGCCGCCG CAGGGCATCA GGCTGACCCC GCGCCACTAC GCCTACCTGA AGATATCCGA AGGCTGCAAC CACAGTTGCG CCTTCTGCAT CATCCCGTCC ATGCGCGGCA AACTGGTCAG CCGCCCGGCG GGCGAGGTGC TGGGCGAGGC CGAGCGTCTG GTCGGGGCCG GCGTCCAGGA GCTCCTGGTG ATCGCCCAGG ACACCAGCGC CTACGGCGTC GACCTCAGGT ACCGGACCGA CTTCTGGAAC GGCCGGCCGG TGAAGACGCG TCTGCTCGAA CTGTGCGAGG AACTCGGCAG GATGGGCGTC TGGGTGCGTC TGCACTACGT CTACCCCTAC CCCAGCGTCG ACGAGCTGAT CCCGCTGATG GCCGCCGGCA AGATACTGCC CTACCTGGAC ATCCCCCTCC AGCACGCCAG CCCGAAGATC CTCAAGGCGA TGAAACGTCC GGCCTTCGAG GACCAGACCC TCGCGCGCAT CAGGAAATGG CGGGAGATCT GTCCGGAGCT GACCATCCGC TCGACCTTCA TCGTCGGCTT CCCCGGCGAG ACCGAGGAGG ACTTCCAGTA CCTGCTCGAC TGGCTGAGCG AGGCCCAGCT CGACCGCGTC GGCTGCTTCC AGTATTCGGC GGTGGATGGC GCACCGGCCA ACGAACTGGA AGGCGCGGTA GCGGAAGAGG TCAAGCAGGA ACGCTGGGAG CGCTTCATGG CCCACCAGCA GGCGATCAGC GCGGCGCGCC TGCAACGCCG GATCGGCCAG GAGATCGAGG TGCTGATCGA CGAGGTCGAC GAGCAGGGTG CCGTCGGCCG CTCCTGGGCC GACGCCCCGG AGATCGACGG CAATGTCTAC GTCGACAGTG CACAGGTGCT CAAACCCGGT GACAAGGTGC GCGTGCGCGT CACCGATGCC GATGAGTACG ATCTCTGGGC CGAAACCCTC TGA
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Protein sequence | MSKEVPSIGW VSLGCPKATV DSERILTQLR TEGYRIVPSY EEADVVVVNT CGFIDSAKAE SLDAIGEALA ENGKVIVTGC MGVSEEAIRN VHPSVLAVTG PQQYEQVVSA VHEVAPPKAD HDPFVDLVPP QGIRLTPRHY AYLKISEGCN HSCAFCIIPS MRGKLVSRPA GEVLGEAERL VGAGVQELLV IAQDTSAYGV DLRYRTDFWN GRPVKTRLLE LCEELGRMGV WVRLHYVYPY PSVDELIPLM AAGKILPYLD IPLQHASPKI LKAMKRPAFE DQTLARIRKW REICPELTIR STFIVGFPGE TEEDFQYLLD WLSEAQLDRV GCFQYSAVDG APANELEGAV AEEVKQERWE RFMAHQQAIS AARLQRRIGQ EIEVLIDEVD EQGAVGRSWA DAPEIDGNVY VDSAQVLKPG DKVRVRVTDA DEYDLWAETL
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