Gene Avin_37650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_37650 
SymbolrimO 
ID7762657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3810537 
End bp3811859 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content66% 
IMG OID643806631 
Productribosomal protein S12 methylthiotransferase 
Protein accessionYP_002800884 
Protein GI226945811 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG AAGTTCCTAG CATAGGTTGG GTGTCGCTCG GGTGCCCGAA GGCCACCGTC 
GACTCCGAAC GCATCCTCAC CCAGTTGCGC ACGGAGGGTT ACCGGATCGT ACCGTCCTAC
GAGGAGGCCG ACGTGGTGGT GGTCAACACC TGCGGCTTCA TCGACAGCGC CAAGGCCGAG
TCCCTCGATG CCATCGGCGA GGCCCTGGCG GAAAATGGCA AGGTGATCGT CACCGGCTGC
ATGGGCGTAT CCGAGGAAGC CATCCGCAAC GTGCATCCCA GCGTGCTGGC GGTCACCGGC
CCGCAGCAGT ACGAGCAGGT GGTCAGCGCC GTGCACGAGG TGGCGCCGCC GAAGGCCGAC
CACGATCCCT TCGTCGATCT GGTGCCGCCG CAGGGCATCA GGCTGACCCC GCGCCACTAC
GCCTACCTGA AGATATCCGA AGGCTGCAAC CACAGTTGCG CCTTCTGCAT CATCCCGTCC
ATGCGCGGCA AACTGGTCAG CCGCCCGGCG GGCGAGGTGC TGGGCGAGGC CGAGCGTCTG
GTCGGGGCCG GCGTCCAGGA GCTCCTGGTG ATCGCCCAGG ACACCAGCGC CTACGGCGTC
GACCTCAGGT ACCGGACCGA CTTCTGGAAC GGCCGGCCGG TGAAGACGCG TCTGCTCGAA
CTGTGCGAGG AACTCGGCAG GATGGGCGTC TGGGTGCGTC TGCACTACGT CTACCCCTAC
CCCAGCGTCG ACGAGCTGAT CCCGCTGATG GCCGCCGGCA AGATACTGCC CTACCTGGAC
ATCCCCCTCC AGCACGCCAG CCCGAAGATC CTCAAGGCGA TGAAACGTCC GGCCTTCGAG
GACCAGACCC TCGCGCGCAT CAGGAAATGG CGGGAGATCT GTCCGGAGCT GACCATCCGC
TCGACCTTCA TCGTCGGCTT CCCCGGCGAG ACCGAGGAGG ACTTCCAGTA CCTGCTCGAC
TGGCTGAGCG AGGCCCAGCT CGACCGCGTC GGCTGCTTCC AGTATTCGGC GGTGGATGGC
GCACCGGCCA ACGAACTGGA AGGCGCGGTA GCGGAAGAGG TCAAGCAGGA ACGCTGGGAG
CGCTTCATGG CCCACCAGCA GGCGATCAGC GCGGCGCGCC TGCAACGCCG GATCGGCCAG
GAGATCGAGG TGCTGATCGA CGAGGTCGAC GAGCAGGGTG CCGTCGGCCG CTCCTGGGCC
GACGCCCCGG AGATCGACGG CAATGTCTAC GTCGACAGTG CACAGGTGCT CAAACCCGGT
GACAAGGTGC GCGTGCGCGT CACCGATGCC GATGAGTACG ATCTCTGGGC CGAAACCCTC
TGA
 
Protein sequence
MSKEVPSIGW VSLGCPKATV DSERILTQLR TEGYRIVPSY EEADVVVVNT CGFIDSAKAE 
SLDAIGEALA ENGKVIVTGC MGVSEEAIRN VHPSVLAVTG PQQYEQVVSA VHEVAPPKAD
HDPFVDLVPP QGIRLTPRHY AYLKISEGCN HSCAFCIIPS MRGKLVSRPA GEVLGEAERL
VGAGVQELLV IAQDTSAYGV DLRYRTDFWN GRPVKTRLLE LCEELGRMGV WVRLHYVYPY
PSVDELIPLM AAGKILPYLD IPLQHASPKI LKAMKRPAFE DQTLARIRKW REICPELTIR
STFIVGFPGE TEEDFQYLLD WLSEAQLDRV GCFQYSAVDG APANELEGAV AEEVKQERWE
RFMAHQQAIS AARLQRRIGQ EIEVLIDEVD EQGAVGRSWA DAPEIDGNVY VDSAQVLKPG
DKVRVRVTDA DEYDLWAETL