Gene Avin_37060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_37060 
SymbolilvM 
ID7762600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3762098 
End bp3764347 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content67% 
IMG OID643806573 
ProductRelA/SpoT protein 
Protein accessionYP_002800827 
Protein GI226945754 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00582579 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACAGG TGAGAGCGCA GCAGCCGGTC AACACCGACG GCAGCATCAA TCTTGAGGCT 
TGGCTGGATC ATGTCCTGAA GATGGACCCG GCCCTGGAGC GCGAGGCCCT GAAGACGGCC
TGCGAGTACG TCCGCGAGGC CGAGCGGCGG GCCCGGCCGG ATGCGGAGAG GCCTGCCGTC
GGCACGTCCA CCTTCCTGGT CGGCCTGGAG ATCGCGGAAA TTCTCGCCGA CCTCAAGCTG
GACCAGGATT CCCTGGTCGC CGCCGTGCTC TATCGTGGCG TGCGCCAGAA GCAGATCGCC
TTGGACGAGG TGCAGCGGCG TTTCGGCCAG GTGGTCGCCA AGCTGATCGA GGGCGTGCTG
CGCATGGCGG CGATCAGCGA CAGCCTCAAT CCGCGCGAGT CCCTGGTGCT GGATGCCCAG
ACCCAGGTGG AGAACCTGCG CAAGATGCTG GTGGCGATGG TCGACGACGT GCGTGTCGCC
CTGATCAAGC TGGCCGAGCG CACCTGCGCG ATCCGCGCGG TCAAGCACGC CGACGAGGAG
CGGCGCCAGC GCGTCGCCCG CGAGGTGTCC GCCATCTATG CGCCGCTGGC CCATCGCCTC
GGCATCGGTC ACATCAAGTG GGAGCTGGAG GATCTGGCCT TCCGCTACCT CGAGCCCGAG
CAGTACAAGC AGATCGCCAA GCTGCTCCAC GAGCGCCGGC TCGATCGCGA GCAGTTCATC
GCCAAGGTCG TCCAGGAGCT CAAGGAGGCG CTGGCCGGCG CCGGCATCAA GGCCGACATC
AACGGTCGGG CCAAGCACAT CTACTCGATC TGGCGCAAGA TGCAGAAGAA GGGTCTGCAG
TTCAGCCAGA TCTACGACGT TCGCGCCGTG CGCGTGCTGG TTCCGGAAGT GCGCGACTGC
TATACCGCCC TCGGCATCGT CCACTCGCTG TGGCGGCACA TCCCCAGGGA GTTCGACGAC
TACATCGCCA ATCCCAAGGA AAATGGTTAC CGCTCGTTGC ACACCGCGGT GATCGGCCCG
GACGGCAAGA CCCTGGAAGT GCAGATCCGC ACCCACGCCA TGCACGAGGA GGCCGAGCTG
GGCGTCTGCG CCCACTGGCG CTACAAGGGC ACCGACCTCA AGTCCACTTC CAGCCATTAC
GAGGAGAAGA TCGCCTGGCT GCGCCAGGTG CTCGAGTGGC ATGAGGAACT GGGCGACATC
GGCGGCCTGG CCGAGCAGTT GCAGGTCGAC ATCGAGCCCG ACCGGGTCTA CGTGTTCACC
CCGGACGGCC ACGCCATCGA CCTGCCCAAG GGCGCCACGC CGCTGGACTT CGCCTACCGG
GTACACACCG AGATCGGCCA CAACTGCCGC GGCGCCAAGA TCGACGGGCG CATAGTGCCG
CTCAACTACA CCCTGCAGAC CGGCGAGCAG GTGGAGATCA TCACCGGCAA GAACGGCTCG
CCGAGCCGCG ACTGGCTGAA CTCCAACCTC GGCTACGTCA CCACCTCGCG GGCCCGGGCG
AAGATCGTCC ACTGGTTCAA GCTGCAGGCG CGCGACCAGA ACGTCGCCGC CGGCAAGGCG
CTGCTCGAGC GCGAACTCGC CCGGCTCGAC CTGGCGCCGG TGGATTACGA CCGGCTGGCG
GAAAAGAGCA ACCTGAAGAC CGCCGAGGAC CTGTTCGCCG CCCTCGGCGC CGGCGACCTG
CGTCTGGCCC ACGTGGTCGG GCTGGCCCAG CAACTGGTCG AGCCGGAGCG CAGCGCCGGG
CAGTTCGAGC TGATTCCGCG CAAGGCCGGC GTTCCGCACA AGCCGGGCAA GCGCGACGAT
ATCCAGATCC AGGGTGTGGG CAACCTGCTG ACACAGATGG CCGGCTGCTG CCAGCCGCTG
CCCGGCGACC CCATCGTCGG CTACATCACC CAGGGCCGCG GGGTCACCAT CCATCGCCAG
GACTGCGCCA ACGCCCTGCA ACTGGCCAGC CGCGAGCCGG AACGGATCAT CCAGGTCAGT
TGGGGACCGG TGCCGGTGCA GACCTACCCG GTGGATATCT TCATTCGCGC CTACGACCGT
TCCGGCCTGT TGCGTGACGT GTCCCAGGTG CTGCTCAACG AGCGGATCAA CGTGCTGGCC
GCCAACACCC TGTCGAACAA GGAAGACAGC ACGGCGCAGA TGGTCCTGAC CATCGAGATC
CCCGGACTGG ATGCCCTCGG CCGGCTGCTG GCGCGTATCG CCCAGTTGCC CAACGTGATC
GAGGCGCGCC GCCACCGCGC GGTTTCCTGA
 
Protein sequence
MVQVRAQQPV NTDGSINLEA WLDHVLKMDP ALEREALKTA CEYVREAERR ARPDAERPAV 
GTSTFLVGLE IAEILADLKL DQDSLVAAVL YRGVRQKQIA LDEVQRRFGQ VVAKLIEGVL
RMAAISDSLN PRESLVLDAQ TQVENLRKML VAMVDDVRVA LIKLAERTCA IRAVKHADEE
RRQRVAREVS AIYAPLAHRL GIGHIKWELE DLAFRYLEPE QYKQIAKLLH ERRLDREQFI
AKVVQELKEA LAGAGIKADI NGRAKHIYSI WRKMQKKGLQ FSQIYDVRAV RVLVPEVRDC
YTALGIVHSL WRHIPREFDD YIANPKENGY RSLHTAVIGP DGKTLEVQIR THAMHEEAEL
GVCAHWRYKG TDLKSTSSHY EEKIAWLRQV LEWHEELGDI GGLAEQLQVD IEPDRVYVFT
PDGHAIDLPK GATPLDFAYR VHTEIGHNCR GAKIDGRIVP LNYTLQTGEQ VEIITGKNGS
PSRDWLNSNL GYVTTSRARA KIVHWFKLQA RDQNVAAGKA LLERELARLD LAPVDYDRLA
EKSNLKTAED LFAALGAGDL RLAHVVGLAQ QLVEPERSAG QFELIPRKAG VPHKPGKRDD
IQIQGVGNLL TQMAGCCQPL PGDPIVGYIT QGRGVTIHRQ DCANALQLAS REPERIIQVS
WGPVPVQTYP VDIFIRAYDR SGLLRDVSQV LLNERINVLA ANTLSNKEDS TAQMVLTIEI
PGLDALGRLL ARIAQLPNVI EARRHRAVS