Gene Avin_36720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_36720 
Symbol 
ID7762567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3731513 
End bp3732262 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID643806540 
Producthypothetical protein 
Protein accessionYP_002800794 
Protein GI226945721 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTC ATTCCAAATG GGCCAACATC AAGCACCGCA AGGAGCGTCA GGACGCCAAG 
CGGGGCAAGA TCTTCACCAA GCTGATCCGC GAGCTGACCG TCGCCGCCAA GCACGGCGGC
GGCAACCCGG CGGACAATCC CCGGCTGCGC CTGGCGATGG ACAAGGCCCT GACCGCCAAC
ATGACCCGCG ATACCATCGA TCGCGCCATC GCCCGCGGCG CCGGCACCAG CGAAGCCGAC
AACATGGCCG AGCTGAGCTA CGAGGGCTAC GCGCCGAGCG GTGTGGCGAT CATCGTCGAG
GCCCTGACCG ACAACCGCAA CCGTACCGCT GCCGAAGTAC GCCATGCCTT CAGCAAGTGC
GGTGGCAACC TGGGTACCGA CGGTTCGGTG GCCTATATGT TCGATCGCAA GGGCCAGATC
AGCTTCGCTC CGGGGGTCAA CGAGGACGCC CTGATGGAAG CGGCCCTGGA GGCCGGTGCC
GACGACGTGG TCGGCAATGA CGATGGCTCG GTGGACGTGT TCACCAGCTT CGCCGACTTC
CACACGGTCA ACGAGGCGCT GGTCGCCGCT GGCTTCAAAG GCGACGAGGC CGAGGTGGCG
ATGATTCCGT CGATCACCGC GCCGATCGCC GATCTGGAAA CCGCACAGAA GGTGATGAAG
CTGATCGACA TGCTGGAAGA CCTGGACGAC GTGCAGAACG TCTACCACAA CGCCGAGATT
CCCGACGAGA TCATGGAGCA GCTCGACTGA
 
Protein sequence
MAGHSKWANI KHRKERQDAK RGKIFTKLIR ELTVAAKHGG GNPADNPRLR LAMDKALTAN 
MTRDTIDRAI ARGAGTSEAD NMAELSYEGY APSGVAIIVE ALTDNRNRTA AEVRHAFSKC
GGNLGTDGSV AYMFDRKGQI SFAPGVNEDA LMEAALEAGA DDVVGNDDGS VDVFTSFADF
HTVNEALVAA GFKGDEAEVA MIPSITAPIA DLETAQKVMK LIDMLEDLDD VQNVYHNAEI
PDEIMEQLD