| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_36620 |
|---|
| Symbol | |
|---|
| ID | 7762557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 3723516 |
|---|
| End bp | 3724337 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643806530 |
|---|
| Product | tol-pal system YbgF-like protein |
|---|
| Protein accession | YP_002800784 |
|---|
| Protein GI | 226945711 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT ACCGCCGCAT CATCTCCCTG TTGGCGCTCG GCCTGCCGCT TGCGGCTTGG
GCCGGGGTTC CCGTTGTGGA TAATTCCGCC GGTTACGGTT ATGCCAGTAA CGGTTACCCA
CAGAAGATAC AGGATGCGAG CGGTGCGTAT GCCGGGGGGG CGATGACTAC ACCGACCTCG
GCACAGGGCG AGCTGTTCCT GCAATTGCAG CAGTTGCAGG ACGAAGTGTC GCGTCTGCGC
GGCATGGTCG AGGAGCAGCA GTACGAGATC CGCCAGTTGA AGCAGGAAAG CCTGGATCGC
TACAAGGAAC TCGACGGCCG TTTGTCAGGG GGGGCAGGCT CTCCTTCCCC GCAGCAGGCT
CCTGCTGGCG CTGTCGGGGC TGCCAGCGCA GCCTCTGTTC CGCCTGCGGC CGGCCAAGTT
CCGGCGAGCA GTGGGCCGGC CGATCCGGAA AAGGAAAAGC TGTATTACGA CGCAGCTTTC
GACCTGATCA AGACCAAGGA TTTCGAGAAG GCCAGCCAGG CGTTCACGGC CTTCCTGCAC
AAATATCCCA ACAGTCAGTA TGCTGGCAAT GCGCAGTATT GGTTGGGTGA AGTGAATCTG
GCCAAGGGCG ATCTACAGGG AGCCGGCCAG GCTTTCGCAC GGGTCAGCCA GAACTATCCG
AAGCATTCCA AGGTGCCCGA CTCTCTGTAC AAGCTGGCGG ACGTCGAACG CCGCCTGGGC
AATACGGAGA AGGCGAAATC AGCCTTGCAG CAGGTCATCG CCCAGTATCC CGGCACTTCG
GCAGCCCAGT TGGCTCAGCG CGATCTGCAG ACCATGCGCT GA
|
|---|
| Protein sequence | MNQYRRIISL LALGLPLAAW AGVPVVDNSA GYGYASNGYP QKIQDASGAY AGGAMTTPTS
AQGELFLQLQ QLQDEVSRLR GMVEEQQYEI RQLKQESLDR YKELDGRLSG GAGSPSPQQA
PAGAVGAASA ASVPPAAGQV PASSGPADPE KEKLYYDAAF DLIKTKDFEK ASQAFTAFLH
KYPNSQYAGN AQYWLGEVNL AKGDLQGAGQ AFARVSQNYP KHSKVPDSLY KLADVERRLG
NTEKAKSALQ QVIAQYPGTS AAQLAQRDLQ TMR
|
|---|
| |