Gene Avin_35720 details

Gene Information

• Locus tag: Avin_35720
• Symbol: trbB
• ID: 7762466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 3643354
• End bp: 3644406
• Gene Length: 1053 bp
• Protein Length: 350 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643806439
• Product: P-type conjugative transfer ATPase TrbB
• Protein accession: YP_002800694
• Protein GI: 226945621
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4962] Flp pilus assembly protein, ATPase CpaF
• TIGRFAM ID: [TIGR02782] P-type conjugative transfer ATPase TrbB

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.469898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCG TACCGAAGTC ATCCACCACC GCCGCTCTGG ATCGCCGCAT TCAGATGCTG 
CGCACGGCAA TGGGGCCGCT GATCGCCGCC GCGCTGGAAG ACCCGGACGT GGTGGAAATC 
ATGCTCAACC CCGACCGCAC CTTGTGGGTG GATCGGCTGT CGTCAGGCCG CGCGCCGCTG 
GGCGTCGAGC TGCCCGAAGC CGATGGTGAA CGCATCATCC GTCTTGTCGC GGCCCACGTC 
GGCGCGGAAG TGCATCGCGG CCAGCCGCTG CTGACTGCCG AGCTGCCGGA GACGGGCGAA 
CGCTTCGAGG GCATCTTGCC GCCGGCTGCA CCGGGGCCGG CGTTCGCGCT GCGCAAGCGC 
GCCGTGAACA TCATCGGCCT GGACCGCTAT GTGGCCGACG GCATCCTGAC CGCCGGCCAG 
GCGGACTTCC TGCGCCGCGC CGTGCGCGAG CGGCAGAACG TCCTGATCGC AGGCGGCACC 
AGCACCGGCA AGACCACGCT CGCCAACGCC TTGCTGGCCG AAATCGCCGC CACCGGCGAC 
CGCGTGCTGG TGCTCGAAGA CACCATCGAA CTGCAATGCG CGGCCCGCGA CCACGTTCCG 
CTGCGCACGC GCGCCGGCGT CGTGTCGATG CAGGAACTGG TGCGCGCCAC GATGCGCCTG 
CGGCCGGATC GGGTGATCGT CGGCGAGGTG CGCGGCGGCG AAGCCCTGGA CTTGGTGAAG 
GTGTGGGGCA CCGGCCATCC AGGTGGCATC GCCACCATCC ACGCCGGCTC CGCGCTGGGC 
GCGCTGCTGC GGCTGGAGCA ACTGATCCTC GAAGTCGTGG TGAACCCGCC GCGTGCGCTG 
ATCGCCGAGG CGGTCAACGT GGTGATCCAC ATCGCCGGGC GTGGCCGCAA GCGCCACGTC 
GAGAGCATTG CCCGCGTCGT CGGCTTCGAC GCCGCCGGCT ACCAACTGGC GGACGCGCTG 
GAAACGCCGT TTCCCGCGCT GCCGCCGGTT TCCCTCGCAG CCACCGCCGC TGCGCCTTTT 
CCGTCCCCCG ACTCACTTGG AGAACTGCCA TGA 

 

Protein sequence

MSAVPKSSTT AALDRRIQML RTAMGPLIAA ALEDPDVVEI MLNPDRTLWV DRLSSGRAPL 
GVELPEADGE RIIRLVAAHV GAEVHRGQPL LTAELPETGE RFEGILPPAA PGPAFALRKR 
AVNIIGLDRY VADGILTAGQ ADFLRRAVRE RQNVLIAGGT STGKTTLANA LLAEIAATGD 
RVLVLEDTIE LQCAARDHVP LRTRAGVVSM QELVRATMRL RPDRVIVGEV RGGEALDLVK 
VWGTGHPGGI ATIHAGSALG ALLRLEQLIL EVVVNPPRAL IAEAVNVVIH IAGRGRKRHV 
ESIARVVGFD AAGYQLADAL ETPFPALPPV SLAATAAAPF PSPDSLGELP