| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_35380 |
|---|
| Symbol | |
|---|
| ID | 7762433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 3612448 |
|---|
| End bp | 3613683 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643806407 |
|---|
| Product | Peptidase, M48 family |
|---|
| Protein accession | YP_002800662 |
|---|
| Protein GI | 226945589 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACCA GTGTCTATCG CCTGAGCGAA ACCAGCCAGG TACAGGACCG TCGCCTGGAG
TTCGTCCTGC TCGACAGCCC GCAACTGAAC GCCTTTGCCG CCCCCGGCGG CATCATCGGC
GTGAACGGCG GCCTTTTTCT CTACGCAGAG ACCGAAGCCG AATACGCCGC GGTGCTGGCC
CACGAACTGG CGCACCTCTC GCAGCGCCAT TTCGCGCGTG GGCTCGAAGC CCAGCAACGC
CTCCAGCTTC CCATGATGGC CACCATGCTT GCCGGCATCA TCGCTGCCGC TGCAGGTGCC
GGAGACGCCG GCATGGCGGC AATTGCCTCC AGCCAGGCGG CGGCAATGCA GGAAATGCGG
CGCTTTTCCC GCCAGAACGA ACAGGAAGCC GACCGCATCG GCCTGCTCAA TCTGGAAAGG
GCTGGTTATG ACCCGCGCGC CATGCCGAGC ATGTTCGAGC GCCTGATGCG TCAGTACCGC
TACGACGCCA AACCGCCGGA GTTCCTTCTG ACCCACCCGG TCACCGAATC GCGCATCGCC
GATACCCGTA ACCGCGCAGA GCAATATCGC CCGGGCGGCC GTCAGGACAA CCACCGCTAC
CAGTTGATGC GCGCCCGTGT GCAACTCATC TACGAGCAGA CCCCCGGCAT GGCCGTGAAG
CGTTTCCGCG CCATGCTCGA CGAACAACCC GCATCCACGT CCGCACGCTA CGGACTGGTG
CTGGCCCTGA CCAAGAGCGG CCAGCTCAAC GAAGCCCGGG AAACGCTGCA GCCCCTGCTC
AACAAGTCGC CCAACGACAT CGACTACAAT CTTGCCGCGG CTGCCCTGGA CATCACCGCC
AACCGCCTTG CGGAAGCCGA AGCTCGGATC AAGCGCCTGC TCGCCCTGTA TCAGGACAAC
TACCCGTTGC GCCAGGCCCA GGCAGACCTG CTGCTCAAGC AGAACCAGCC GGCAGCAGCG
GAGAAAATAC TCAACGAGTT GCTCGCCAAT CGCCCTCAGG ACCCGGATGT CTGGTACATG
GCCGCGGAAG TTCGCGGCCT GTCCGGCGAC ATCATCGGGG TACACCAGGC CCGCGCCGAG
TACTTTGCTC TGGTCGGCAA TTATGACCAG GCCATCGAAC AATTGAATTT TGCCAAGCGT
CGCGCCAGCA GCAACTTCCA GTTGGCCGCA CGCATGGATG CCCGGCAGCA GGAACTGAAA
GAAGAAAAGA AGATGATCGA GGAAATGCTG CGCTGA
|
|---|
| Protein sequence | METSVYRLSE TSQVQDRRLE FVLLDSPQLN AFAAPGGIIG VNGGLFLYAE TEAEYAAVLA
HELAHLSQRH FARGLEAQQR LQLPMMATML AGIIAAAAGA GDAGMAAIAS SQAAAMQEMR
RFSRQNEQEA DRIGLLNLER AGYDPRAMPS MFERLMRQYR YDAKPPEFLL THPVTESRIA
DTRNRAEQYR PGGRQDNHRY QLMRARVQLI YEQTPGMAVK RFRAMLDEQP ASTSARYGLV
LALTKSGQLN EARETLQPLL NKSPNDIDYN LAAAALDITA NRLAEAEARI KRLLALYQDN
YPLRQAQADL LLKQNQPAAA EKILNELLAN RPQDPDVWYM AAEVRGLSGD IIGVHQARAE
YFALVGNYDQ AIEQLNFAKR RASSNFQLAA RMDARQQELK EEKKMIEEML R
|
|---|
| |