Gene Avin_34880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34880 
SymbolfumC2 
ID7762383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3557721 
End bp3559115 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content70% 
IMG OID643806354 
Productfumarate hydratase 
Protein accessionYP_002800612 
Protein GI226945539 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.143963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCA CCGAAACCGA CAGCTTGGGG CCGATCGAGG TTCCCGACGA AGCCTACTGG 
GGTGCCCAGA CACAGCGCTC GCTGATCAAC TTCGCCATCG GCCAGGAGCG CATGCCGCTC
GCCGTGCTGC ACGCCCTGGC GCTGATCAAG AAGGCCGCCG CCCGAGTCAA CGACCGCATC
GGCGAGCTGC CGCCGGAAAT CGCCCGGCTG ATCGAGCAGG CCGCCGACGA GGTACTCGCC
GGCCAGCACG ACGGGCAGTT CCCGCTGGTG GTCTGGCAGA CCGGCAGCGG CACCCAGAGC
AACATGAACG TCAACGAAGT GATCGCCGGG CGCGCCAACG AGCTGGCCGG CGGCCCGCGC
GGGGGCAAGA GCCCGGTGCA CCCCAACGAC CACGTCAACC ACGGGCAGAG TTCCAACGAC
TGCTTTCCCA CCGCCATGCA CATCGCCACC GTGCAGGCCG TGCAGCGGGA ATTGCTGCCG
GCGGTCGAGG AACTGGCCGC GGCTCTCGAC AGCCAGGCGA AGCGCCATGC GCATCTGGTC
AAGACCGGGC GCACCCACCT GATGGACGCC ACGCCGGTGA CCTTCGGCCA GGAACTCTCG
GCCTTCGTCG CCCAGCTCGG CCTGGCCGAG CGGGCCATCC GCGCCGCGCT GCCGGCGGTC
TGCGAGCTGG CCCAGGGCGG GACCGCGGTC GGCACCGGGC TGAACGCGCC GCACGGCTTC
GCCGAGGCGA TCGCCGCGGA ACTGGCCGCC CTCTCCGGCC TGCCCTTCGT CTCGGCGCCG
AACAAGTTCG CCGCCCTCGC CGGCCACGAG CCGCTGGTGC ACCTTTCGGG CGCCCTGAAG
ACCCTGGCGG TGGCGCTGAC CAAGATCGCC AACGACCTGC GCCTGCTCGG CTCCGGTCCG
CGCGCCGGCC TCGCCGAGGT GCGCCTGCCG GCCAACGAGC CGGGTAGCTC GATCATGCCC
GGCAAGGTCA ACCCGACCCA GTGCGAGGCC CTGGCCATGC TCGCCTGCCA GGTCATGGGC
AACGACAGCA CCATCGCCTT CGCCGCCAGC CAGGGGCACC TGCAGCTCAA CGTCTACAAG
CCGGTGATCA TCCACAACCT GCTGCAATCC GTGCGTCTGC TCGCCGACGG TTGCCGCAAC
TTCCGCGAGC ACTGCATCGA GGGGCTGGAG CCGGACCCGC GACGGATGAG CGAGCACCTC
GAGCGCAGCC TGATGCTGGT GACCGCGCTG AACCCGCACA TCGGCTACGA CAAGGCCGCG
GAAATCGCCA AGAAGGCCTA CGCCGAAGGC ACCACCCTGC GCGAGGCCGC CCTGGCCCTC
GGCCACCTCA GCGGCGAGGA GTTCGACGCC TGGGTGCGTC CGCAGGACAT GCTGGAAGCC
GGCCGGCACG ACTGA
 
Protein sequence
MSRTETDSLG PIEVPDEAYW GAQTQRSLIN FAIGQERMPL AVLHALALIK KAAARVNDRI 
GELPPEIARL IEQAADEVLA GQHDGQFPLV VWQTGSGTQS NMNVNEVIAG RANELAGGPR
GGKSPVHPND HVNHGQSSND CFPTAMHIAT VQAVQRELLP AVEELAAALD SQAKRHAHLV
KTGRTHLMDA TPVTFGQELS AFVAQLGLAE RAIRAALPAV CELAQGGTAV GTGLNAPHGF
AEAIAAELAA LSGLPFVSAP NKFAALAGHE PLVHLSGALK TLAVALTKIA NDLRLLGSGP
RAGLAEVRLP ANEPGSSIMP GKVNPTQCEA LAMLACQVMG NDSTIAFAAS QGHLQLNVYK
PVIIHNLLQS VRLLADGCRN FREHCIEGLE PDPRRMSEHL ERSLMLVTAL NPHIGYDKAA
EIAKKAYAEG TTLREAALAL GHLSGEEFDA WVRPQDMLEA GRHD