Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_34450 |
Symbol | lysC |
ID | 7762340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3518219 |
End bp | 3519454 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643806311 |
Product | aspartate kinase |
Protein accession | YP_002800569 |
Protein GI | 226945496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0250796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTGA TCGTACAGAA ATTCGGGGGC ACTTCTGTAG GCTCCATCGA GCGGATCGAG CAGGTAGCCG AGAAGGTCAA GAAGTTCCGC GACAACGGTG ACGACATCGT GGTCGTGGTT TCCGCCATGA GCGGCGAAAC CAATCGCCTG ATCGGTCTGG CCAAGCAGAT CAGCGAGCAG CCCGTGCCGC GCGAGCTGGA TGTGATGGTG TCGACCGGCG AACAGGTGAC CATTGCCCTG CTGGCCATGG CGCTGATCAA GCGCGGCGTG CCGGCGGTGT CCTACACCGG CAACCAGGTT CGCATCCTTA CCGACAGTTC CTTCACCAAG GCCCGTATCC TGCAGATCGA TGACCGGAAA CTGCGTACCG ATCTCAAGGC CGGCCGTGTG GTGGTGGTCG CCGGTTTCCA GGGGGTCGAC GAGCACGGCA ACATCACCAC GCTCGGGCGC GGCGGTTCCG ATACCACCGG GGTGGCTCTG GCCGCGGCCC TGAAGGCCGA CGAATGTCAG ATCTATACCG ATGTCGACGG CGTCTATACC AGCGATCCGC GGGTGGTGCC CAAGGCCCAG CGCCTGGACA AGATCACCTT CGAGGAAATG CTGGAAATGG CCAGCCTGGG CTCCAAGGTA CTGCAGATCC GTTCGGTGGA GTTCGCGGGC AAATACAATG TCCCGCTGCG CGTGCTGCAT AGCTTCCAGG AGGGGCCGGG CACCCTCATT ACCATTGATG AAGAGGAATC CATGGAACAG CCGATCATTT CCGGCATCGC CTTCAATCGC GACGAAGCCA AGCTGACCAT TCGCGGCGTG CCGGACAATC CCGGCGTGGC GTTCAAGATC CTCGGCCCGA TCAGCGAAGC CAATATCGAA GTGGACATGA TCGTGCAGAA CATTGCGCAC GACAACACTA CCGATTTCAC TTTCACCGTA CATCGCAACG ATTATCTGAA CGCCATGCGC GTGCTGGAAA ATACCGCGCG CGAAATCGGC GCACGCGAAG TCATTGGCGA CACCGATATT GCCAAGGTTT CCATCGTCGG AGTCGGCATG CGCTCCCATG CCGGAGTTGC CAGCCGCATG TTCGGAGCTC TGGCCAAGGA GGGGATCAAT ATCCAGATGA TTTCGACTTC GGAAATCAAG GTTTCCGTGG TCATCGAGGA AAAATATCTG GAACTGGCGG TTCGTTCCCT GCACACCGCT TTCGAACTGG ATGCTCCCGC CCGCCAGGGC GAGTGA
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Protein sequence | MALIVQKFGG TSVGSIERIE QVAEKVKKFR DNGDDIVVVV SAMSGETNRL IGLAKQISEQ PVPRELDVMV STGEQVTIAL LAMALIKRGV PAVSYTGNQV RILTDSSFTK ARILQIDDRK LRTDLKAGRV VVVAGFQGVD EHGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT SDPRVVPKAQ RLDKITFEEM LEMASLGSKV LQIRSVEFAG KYNVPLRVLH SFQEGPGTLI TIDEEESMEQ PIISGIAFNR DEAKLTIRGV PDNPGVAFKI LGPISEANIE VDMIVQNIAH DNTTDFTFTV HRNDYLNAMR VLENTAREIG AREVIGDTDI AKVSIVGVGM RSHAGVASRM FGALAKEGIN IQMISTSEIK VSVVIEEKYL ELAVRSLHTA FELDAPARQG E
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