Gene Avin_34280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34280 
SymbolleuC 
ID7762323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3501817 
End bp3503241 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content68% 
IMG OID643806290 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_002800552 
Protein GI226945479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCA AAACGCTCTA CGACAAACTC TGGGACATGC ATGAGGTGAA GCGGCGCGAC 
GATGGCTCGT CGCTGATCTA CATCGATCGC CAGATTCTCC ACGAAGTGAC CTCGCCGCAG
GCCTTCGAGG GGCTGCGCCT GGCCGGGCGC AAGCCGTGGC GCGTGGATGC CAACATCGCC
ACCCCGGACC ACAACGTGCC GACCACCCAG GATCGCCAGT CGGGGGTCGC CGCCATCGCC
GACGAAACCT CGCGCATCCA GGTGCAGACC CTGGACGAGA ACTGCGACGA GTTCGGCATC
GTCGAGTTCA AGATGAACGA CCCGCGCCAG GGCATCGTCC ATGTGGTCGG CCCGGAGCAG
GGCGCCACCC TGCCGGGCAT GACCGTGGTC TGCGGCGACT CGCACACGTC CACCCATGGC
GCCTTCGGCG CGCTGGCCCA CGGCATCGGT ACCTCCGAGG TGGAGCATGT GCTCGCCACC
CAATGCCTGG TGGCCAAGAA GATGAAGAAC ATGCAGGTGC GCGTGGAGGG CGAACTGCCC
CTGGGCGTCA GCGCCAAGGA CATAGTGCTC GCCGTGATCG GCCGGATCGG CACCGCCGGC
GGTACCGGCC ACGCCCTGGA GTTCGCCGGC AGCGCCATCC GCGGCTTGTC CATGGAGGGC
CGCATGACCC TCTGCAACAT GGCCATCGAA GCCGGGGCCC GGGTCGGCAT GGTGGCGGTG
GACGAGAAGA CCATCGACTA CGTCAAGGGC CGCCCCTATG CACCGCAGGG CGCCGACTGG
GACAAGGCGG TCGCCCAGTG GCGGGAACTG GTGTCCGATG CCGATGCCGG GTTCGACACC
GTCGTCGAAC TGAAGGCCGA AGAAATCAGG CCGCAGGTCA CCTGGGGGAC CTCGCCGGAG
ATGGTCCTGC CGGTCGACGA GCGCGTGCCG GACCCGGCTT CCGAGAGCGA TCCGGTCAAG
CGCGATTCCA TCGTTCGCGC GCTGAAGTAC ATGGGCCTCG CGGCCAATCA GCCGATCGGC
GAGATCAAGG TCGACCGCGT GTTCATCGGT TCCTGCACCA ACTCGCGGAT CGAGGATCTG
CGCGCCGCCG CCGAGGTGGC CAAGGGCCGC AAGGTCGCCG CGAGCGTCAA GCAGGCGCTG
GTGGTGCCGG GCTCCGGGCT GGTCAAGGAG CAGGCGGAGA AGGAGGGGCT GGACAGGATC
TTCATCGAGG CCGGTTTCGA GTGGCGCGAG CCGGGTTGCT CCATGTGCCT GGCGATGAAC
CCGGACCGCC TGGAGAGCGG CGAGCACTGC GCCTCCACGT CCAACCGCAA CTTCGAGGGC
CGTCAGGGCG CCGGCGGGCG TACCCACCTG GTCAGTCCGG CCATGGCCGC CGCCGCCGCG
GTCGCCGGCC GTTTCGTCGA TGTACGCCAA TTGCTCCAGG CCTGA
 
Protein sequence
MAGKTLYDKL WDMHEVKRRD DGSSLIYIDR QILHEVTSPQ AFEGLRLAGR KPWRVDANIA 
TPDHNVPTTQ DRQSGVAAIA DETSRIQVQT LDENCDEFGI VEFKMNDPRQ GIVHVVGPEQ
GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QCLVAKKMKN MQVRVEGELP
LGVSAKDIVL AVIGRIGTAG GTGHALEFAG SAIRGLSMEG RMTLCNMAIE AGARVGMVAV
DEKTIDYVKG RPYAPQGADW DKAVAQWREL VSDADAGFDT VVELKAEEIR PQVTWGTSPE
MVLPVDERVP DPASESDPVK RDSIVRALKY MGLAANQPIG EIKVDRVFIG SCTNSRIEDL
RAAAEVAKGR KVAASVKQAL VVPGSGLVKE QAEKEGLDRI FIEAGFEWRE PGCSMCLAMN
PDRLESGEHC ASTSNRNFEG RQGAGGRTHL VSPAMAAAAA VAGRFVDVRQ LLQA