Gene Avin_34260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34260 
SymbolleuB 
ID7762321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3499977 
End bp3501059 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID643806288 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002800550 
Protein GI226945477 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AGATTCTGGT TCTTCCGGGC GACGGCATCG GCCCGGAAAT CATGGCCGAG 
GCGGTTAAGG TCCTGCAGTT GGCCAACGAG AAGTACCAAC TGGGCTTCGT ACTGGGCTAC
GACGAACTGG GCGGGGCGGC CGTCGACAAG TACGGCGTGC CGCTGGCCGA CGAGACCCTG
GAGCGCGCGC GCGCCGCCGA TGCCATCCTG CTCGGCGCCG TCGGCGGTCC GAAATGGGAC
GCCATCGACC CGGCCATCCG CCCGGAGCGC GGCCTGCTGA AAATCCGTTC GCAACTGGGC
CTGTTCGGCA ACCTGCGCCC GGCGCTGCTC TATCCGCAAC TGGCCGAGGC CTCCACCCTC
AGGCCCGAAG TGGTCGCCGG CCTGGACATC CTCATCGTCC GCGAACTGAC CGGCGGCATC
TACTTCGGCG CCCCGCGCGA GAGCCGGTTG CTTGCGAACG GCGAGCGCAT GGCCTACGAC
ACCCTGCCGT ACAGCGAAAG CGAGATCCGC CGCATCGCCA AGGTCGGTTT CGACATGGCG
CGCGTGCGCG GCAAGAAGCT GTGCTCGGTG GACAAGGCCA ACGTACTGGC CTCCAGCCAA
CTGTGGCGTG CGGTGGTCGA GGAGGTCGCC AAGGACTATC CGGACGTCGT GCTGTCGCAC
ATGTACGTCG ACAACGCGGC CATGCAACTG GTGCGTGCGC CCAAGCAATT CGACGTGATC
GTCACCGACA ACATGTTCGG CGACATCCTG TCGGACGAGG CTTCCATGCT CACCGGCTCG
ATCGGCATGC TGCCGTCGGC TTCGCTGGAC GCCGACAACA AGGGCATGTA CGAGCCGTGC
CACGGCAGCG CGCCGGACAT CGCCGGCAAG GGTATCGCCA ATCCGCTGGC CACCATCCTC
TCGGTATCGA TGATGCTGCG TTACAGCTTC GGCCAGGTCG AGGCGGCCAA CGCCATCGAG
CAGGCGGTCA GCAAGGTGCT GGACCAGGGG CTGCGCACCG GCGACATCTG GTCGGAGGGC
TGCCGGAAGG TCGGCACGGC CGAGATGGGC GATGCGGTAG TCGCAGCGCT TGCCACGTTG
TAA
 
Protein sequence
MSKQILVLPG DGIGPEIMAE AVKVLQLANE KYQLGFVLGY DELGGAAVDK YGVPLADETL 
ERARAADAIL LGAVGGPKWD AIDPAIRPER GLLKIRSQLG LFGNLRPALL YPQLAEASTL
RPEVVAGLDI LIVRELTGGI YFGAPRESRL LANGERMAYD TLPYSESEIR RIAKVGFDMA
RVRGKKLCSV DKANVLASSQ LWRAVVEEVA KDYPDVVLSH MYVDNAAMQL VRAPKQFDVI
VTDNMFGDIL SDEASMLTGS IGMLPSASLD ADNKGMYEPC HGSAPDIAGK GIANPLATIL
SVSMMLRYSF GQVEAANAIE QAVSKVLDQG LRTGDIWSEG CRKVGTAEMG DAVVAALATL