Gene Avin_32720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_32720 
Symbol 
ID7762170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3350983 
End bp3352167 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID643806140 
ProductResponse regulator 
Protein accessionYP_002800404 
Protein GI226945331 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAATT CCAGTGCCAA GCTGCTGATA ATCGATGACG ACGAAGTCGT CCGTGCCAGC 
CTTGCGGCCT ACCTGGAGGA CAGCGGTTTC CAGGTGTTGC AGGCAGGTAA CGCCCTGCTA
GGGCTCGAGG TCTTCGAGAA CGAGGAGCCT GACTTGGTCA TTTGCGACCT GCGCATGCCG
CAGATCGATG GCCTGGAGCT GATCCGGCGG ATGAGCGAGC AGCAGGGCGA AACCCCTGTC
ATCGTCATGT CCGGTGCGGG AGTCATGAGC GATGTGGTCG AGGCGCTTCG CCTCGGTGCG
GCCGACTACC TGATCAAGCC GCTGGAAGAC CTTGCCGTGC TCGAGCATTC GGTTCGTCGG
GCACTGGACC GAGCGCGTCT GCGTGTGGAG AACCGCCGCT ATCGGGAAAA GCTGGAGGTC
GCCAACCGGG AGTTGCAGGC CAGCCTGAGC CTGTTGCAAG AGGACCAGAA TGCCGGGCGC
CAAGTGCAGT TGAACATGCT GCCGGAAACG CCTTGGGAAG TGGATGGATT GTGTTTCGCC
CACAAGATCA TCCCCTCCCT CTACTTGTCG GGCGATTTCG TCGACTATTT TCGGATCGAT
GAGCGCCGCT TGGGCTTCTA CTTGGCCGAT GTTTCCGGCC ATGGCGCTTC TTCCGCATTC
GTCACCGTGC TACTCAAGTT CATGACCACG CGCCTGCTGT ACGAGTTTCG GCGCAATGGC
GCTTTTCCCG ACTTCAAGCC CTCCGATGTG CTTGCCCACA TCAACCGTGG CTTGATCAAT
TGCAAGCTGG GCAAGCATGT GACCATGCTT GGTGGCCTGA TCGACTTGGC TGCCGATCGG
CTAACCTACT GTGTAGGGGG GCATCTGCCG TTGCCAGTGT TTTATAGCGA TGGCGAGGCT
TCCTACCTGA AGGGGAGCGG CCTGCCGGTC GGCCTGTTTC AGGATGCCCA CTACGAAAAT
TACGAGTTGC AGTTGCCAGC ATCCTTCAGC CTGACCTTGG TATCGGATGG AGTACTGGAT
CTTTTGCCGG GGGAGACGCT CAAAGAGAGA GAGGCCGTTC TGCCGGACCG CGTAAGGGCT
GCAGGAGGTA CTCTGGATGG ATTGCGCCAG GTATTGGGAT TGGCCCAGCT GGGCGAAATG
CCGGATGATA TCGCCTTGCT GGTGTTGAAC AGGAACCTTG CATGA
 
Protein sequence
MHNSSAKLLI IDDDEVVRAS LAAYLEDSGF QVLQAGNALL GLEVFENEEP DLVICDLRMP 
QIDGLELIRR MSEQQGETPV IVMSGAGVMS DVVEALRLGA ADYLIKPLED LAVLEHSVRR
ALDRARLRVE NRRYREKLEV ANRELQASLS LLQEDQNAGR QVQLNMLPET PWEVDGLCFA
HKIIPSLYLS GDFVDYFRID ERRLGFYLAD VSGHGASSAF VTVLLKFMTT RLLYEFRRNG
AFPDFKPSDV LAHINRGLIN CKLGKHVTML GGLIDLAADR LTYCVGGHLP LPVFYSDGEA
SYLKGSGLPV GLFQDAHYEN YELQLPASFS LTLVSDGVLD LLPGETLKER EAVLPDRVRA
AGGTLDGLRQ VLGLAQLGEM PDDIALLVLN RNLA